Detailed information NTG0885621

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RNZ43_RS17595
• Genome accession: NZ_CP135143
• Coordinates: 3511877..3513040 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain L33a
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3506877..3518040

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RNZ43_RS17565	-	3507142..3507561 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
RNZ43_RS17570	comFC	3507635..3508324 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
RNZ43_RS17575	-	3508330..3508614 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
RNZ43_RS17580	comFA	3508672..3510057 (-)	1386	WP_416405860.1	DEAD/DEAH box helicase	Machinery gene
RNZ43_RS17585	-	3510165..3511013 (-)	849	WP_003151387.1	DegV family protein	-
RNZ43_RS17590	degU	3511111..3511800 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RNZ43_RS17595	degS	3511877..3513040 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
RNZ43_RS17600	-	3513263..3513910 (+)	648	WP_007614107.1	YigZ family protein	-
RNZ43_RS17605	-	3513915..3515102 (+)	1188	WP_416405861.1	LCP family protein	-
RNZ43_RS17610	-	3515201..3516277 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
RNZ43_RS17615	tuaH	3516409..3517605 (-)	1197	WP_416405862.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=885621 RNZ43_RS17595 WP_007407484.1 3511877..3513040(-) (degS) [Bacillus velezensis strain L33a]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=885621 RNZ43_RS17595 WP_007407484.1 3511877..3513040(-) (degS) [Bacillus velezensis strain L33a]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGAGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTCGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGTTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951