Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   QN325_RS10570 Genome accession   NZ_CP135101
Coordinates   2067925..2068959 (-) Length   344 a.a.
NCBI ID   WP_000732713.1    Uniprot ID   A0AAV3JGP6
Organism   Streptococcus agalactiae strain HU13/21     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2062925..2073959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN325_RS10530 - 2063502..2063654 (-) 153 Protein_2003 translation initiation factor IF-2 N-terminal domain-containing protein -
  QN325_RS10535 (QN325_10515) - 2063674..2063976 (-) 303 WP_001065560.1 YlxQ-related RNA-binding protein -
  QN325_RS10540 (QN325_10520) rnpM 2063969..2064265 (-) 297 WP_001140526.1 RNase P modulator RnpM -
  QN325_RS10545 (QN325_10525) nusA 2064287..2065438 (-) 1152 WP_000032295.1 transcription termination factor NusA -
  QN325_RS10550 (QN325_10530) rimP 2065474..2065950 (-) 477 WP_041971671.1 ribosome maturation factor RimP -
  QN325_RS10560 (QN325_10540) trmB 2066442..2067077 (-) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QN325_RS10565 (QN325_10545) ccrZ 2067067..2067867 (-) 801 WP_000155919.1 cell cycle regulator CcrZ -
  QN325_RS10570 (QN325_10550) pptB 2067925..2068959 (-) 1035 WP_000732713.1 ABC transporter permease Regulator
  QN325_RS10575 (QN325_10555) pptA 2068961..2069686 (-) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  QN325_RS10580 (QN325_10560) - 2069758..2069943 (+) 186 WP_000368100.1 hypothetical protein -
  QN325_RS10585 (QN325_10565) - 2069995..2070498 (-) 504 WP_000773453.1 hypothetical protein -
  QN325_RS10590 (QN325_10570) - 2070834..2071253 (+) 420 WP_000368097.1 HIT family protein -
  QN325_RS10595 (QN325_10575) - 2071250..2071546 (+) 297 WP_000690175.1 hypothetical protein -
  QN325_RS10600 (QN325_10580) brpA 2071610..2072917 (-) 1308 WP_000708156.1 biofilm formation/cell division transcriptional regulator BrpA -
  QN325_RS10605 (QN325_10585) - 2072926..2073447 (-) 522 WP_000043145.1 GNAT family N-acetyltransferase -
  QN325_RS10610 (QN325_10590) tsaE 2073440..2073883 (-) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40206.54 Da        Isoelectric Point: 10.4988

>NTDB_id=885297 QN325_RS10570 WP_000732713.1 2067925..2068959(-) (pptB) [Streptococcus agalactiae strain HU13/21]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSQLLKDFPKTHWPIIVIVSIIILMLLAMGGIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=885297 QN325_RS10570 WP_000732713.1 2067925..2068959(-) (pptB) [Streptococcus agalactiae strain HU13/21]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAACGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCAGTTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGGAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGTTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTAATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAAGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAACTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTGTGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-159)

Bacterial ABC transporter protein EcsB (EcsB)

(147-329)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.547

100

0.485
  pptB Streptococcus salivarius strain HSISS4

48.256

100

0.483