Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   QN325_RS10575 Genome accession   NZ_CP135101
Coordinates   2068961..2069686 (-) Length   241 a.a.
NCBI ID   WP_000912307.1    Uniprot ID   A0AAV3JGZ9
Organism   Streptococcus agalactiae strain HU13/21     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2063961..2074686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN325_RS10540 (QN325_10520) rnpM 2063969..2064265 (-) 297 WP_001140526.1 RNase P modulator RnpM -
  QN325_RS10545 (QN325_10525) nusA 2064287..2065438 (-) 1152 WP_000032295.1 transcription termination factor NusA -
  QN325_RS10550 (QN325_10530) rimP 2065474..2065950 (-) 477 WP_041971671.1 ribosome maturation factor RimP -
  QN325_RS10560 (QN325_10540) trmB 2066442..2067077 (-) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QN325_RS10565 (QN325_10545) ccrZ 2067067..2067867 (-) 801 WP_000155919.1 cell cycle regulator CcrZ -
  QN325_RS10570 (QN325_10550) pptB 2067925..2068959 (-) 1035 WP_000732713.1 ABC transporter permease Regulator
  QN325_RS10575 (QN325_10555) pptA 2068961..2069686 (-) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  QN325_RS10580 (QN325_10560) - 2069758..2069943 (+) 186 WP_000368100.1 hypothetical protein -
  QN325_RS10585 (QN325_10565) - 2069995..2070498 (-) 504 WP_000773453.1 hypothetical protein -
  QN325_RS10590 (QN325_10570) - 2070834..2071253 (+) 420 WP_000368097.1 HIT family protein -
  QN325_RS10595 (QN325_10575) - 2071250..2071546 (+) 297 WP_000690175.1 hypothetical protein -
  QN325_RS10600 (QN325_10580) brpA 2071610..2072917 (-) 1308 WP_000708156.1 biofilm formation/cell division transcriptional regulator BrpA -
  QN325_RS10605 (QN325_10585) - 2072926..2073447 (-) 522 WP_000043145.1 GNAT family N-acetyltransferase -
  QN325_RS10610 (QN325_10590) tsaE 2073440..2073883 (-) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26835.26 Da        Isoelectric Point: 4.5704

>NTDB_id=885298 QN325_RS10575 WP_000912307.1 2068961..2069686(-) (pptA) [Streptococcus agalactiae strain HU13/21]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=885298 QN325_RS10575 WP_000912307.1 2068961..2069686(-) (pptA) [Streptococcus agalactiae strain HU13/21]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAGCTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772

  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768