Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | OCUAc17_RS01730 | Genome accession | NZ_AP024798 |
| Coordinates | 368177..368659 (+) | Length | 160 a.a. |
| NCBI ID | WP_005804550.1 | Uniprot ID | A0A009N252 |
| Organism | Acinetobacter pittii strain OCU Ac17 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 363177..373659
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCUAc17_RS01720 (OCUAc17_03270) | pilX | 363491..364300 (+) | 810 | WP_005067126.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| OCUAc17_RS01725 (OCUAc17_03280) | pilY1 | 364312..368166 (+) | 3855 | WP_221255055.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| OCUAc17_RS01730 (OCUAc17_03290) | pilY2 | 368177..368659 (+) | 483 | WP_005804550.1 | type IV pilin protein | Machinery gene |
| OCUAc17_RS01735 (OCUAc17_03300) | pilE | 368656..369081 (+) | 426 | WP_221255056.1 | type IV pilin protein | Machinery gene |
| OCUAc17_RS01740 (OCUAc17_03310) | rpsP | 369229..369480 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| OCUAc17_RS01745 (OCUAc17_03320) | rimM | 369500..370048 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| OCUAc17_RS01750 (OCUAc17_03330) | trmD | 370091..370846 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| OCUAc17_RS01755 (OCUAc17_03340) | rplS | 371066..371434 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| OCUAc17_RS01760 (OCUAc17_03350) | lip | 371487..372428 (-) | 942 | WP_078210319.1 | triacylglycerol lipase | - |
| OCUAc17_RS01765 (OCUAc17_03360) | - | 372544..373575 (-) | 1032 | WP_005804553.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17550.79 Da Isoelectric Point: 8.4721
>NTDB_id=88496 OCUAc17_RS01730 WP_005804550.1 368177..368659(+) (pilY2) [Acinetobacter pittii strain OCU Ac17]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=88496 OCUAc17_RS01730 WP_005804550.1 368177..368659(+) (pilY2) [Acinetobacter pittii strain OCU Ac17]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACAGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACAGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
94.375 |
100 |
0.944 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |