Detailed information NTG0884941

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: RMP65_RS07135
• Genome accession: NZ_CP135089
• Coordinates: 1454126..1455130 (-)
• Length: 334 a.a.
• NCBI ID: WP_004298830.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID34567
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1445370..1460029	1454126..1455130	within	0

Gene organization within MGE regions

Location: 1445370..1460029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMP65_RS07125 (RMP65_07125)	-	1451046..1452407 (-)	1362	WP_024384329.1	HAMP domain-containing sensor histidine kinase	-
RMP65_RS07130 (RMP65_07130)	-	1452408..1453058 (-)	651	WP_024384330.1	response regulator transcription factor	-
RMP65_RS07135 (RMP65_07135)	ccpA	1454126..1455130 (-)	1005	WP_004298830.1	catabolite control protein A	Regulator
RMP65_RS07140 (RMP65_07140)	-	1455340..1456425 (+)	1086	WP_024376342.1	Xaa-Pro peptidase family protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36786.97 Da
• Isoelectric Point: 5.5173

>NTDB_id=884941 RMP65_RS07135 WP_004298830.1 1454126..1455130(-) (ccpA) [Streptococcus suis strain ID34567]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGIKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide

• Length: 1005 bp

>NTDB_id=884941 RMP65_RS07135 WP_004298830.1 1454126..1455130(-) (ccpA) [Streptococcus suis strain ID34567]
ATGTTAAACACTGACGATACGGTAACGATTTATGACGTTGCCCGCGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGTTTGGATTATCGTCCGA
ATGCTGTTGCACGTGGCTTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAACATTGCTAATGCTTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTAGTAAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCGATTGTTTTAGCTGGTACCGTGGATTTGGAGCACCAATTACCT
AGTGTCAATATTGACTATGCTGCCGCTAGTGTTGATGCAGTCAATCTGTTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGGCCGCTTGTAGATGACATCAATGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAACGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAAGGCTACGCTCTAGCAGAACGTATTTTGAATGCC
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGCATCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCGCTATATGATATTGGTGCAATTGCTATGCGCATGCTTACCAAAATCATGCATAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (9-54)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-333)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	79.88	99.701	0.796
ccpA	Streptococcus gordonii str. Challis substr. CH1	79.279	99.701	0.79
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	58.912	99.102	0.584