Detailed information NTG0882881

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RJY17_RS08415
• Genome accession: NZ_CP134692
• Coordinates: 1579165..1580328 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain B5
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1574165..1585328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJY17_RS08385 (RJY17_08385)	-	1574429..1574848 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
RJY17_RS08390 (RJY17_08390)	comFC	1574922..1575611 (-)	690	WP_217898730.1	phosphoribosyltransferase family protein	Machinery gene
RJY17_RS08395 (RJY17_08395)	-	1575617..1575901 (-)	285	WP_007407481.1	late competence development ComFB family protein	-
RJY17_RS08400 (RJY17_08400)	comFA	1575959..1577344 (-)	1386	WP_094032535.1	DEAD/DEAH box helicase	Machinery gene
RJY17_RS08405 (RJY17_08405)	-	1577453..1578301 (-)	849	WP_003151387.1	DegV family protein	-
RJY17_RS08410 (RJY17_08410)	degU	1578399..1579088 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RJY17_RS08415 (RJY17_08415)	degS	1579165..1580328 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
RJY17_RS08420 (RJY17_08420)	-	1580551..1581198 (+)	648	WP_061581228.1	YigZ family protein	-
RJY17_RS08425 (RJY17_08425)	-	1581203..1582438 (+)	1236	WP_025285355.1	LCP family protein	-
RJY17_RS08430 (RJY17_08430)	-	1582537..1583613 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
RJY17_RS08435 (RJY17_08435)	-	1583746..1584942 (-)	1197	WP_094032536.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=882881 RJY17_RS08415 WP_007407484.1 1579165..1580328(-) (degS) [Bacillus velezensis strain B5]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=882881 RJY17_RS08415 WP_007407484.1 1579165..1580328(-) (degS) [Bacillus velezensis strain B5]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951