Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   RJY17_RS06445 Genome accession   NZ_CP134692
Coordinates   1188753..1191059 (-) Length   768 a.a.
NCBI ID   WP_094032817.1    Uniprot ID   -
Organism   Bacillus velezensis strain B5     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1183753..1196059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJY17_RS06405 (RJY17_06405) - 1184213..1184644 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  RJY17_RS06410 (RJY17_06410) - 1184644..1184985 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  RJY17_RS06415 (RJY17_06415) - 1184978..1186459 (+) 1482 WP_094032819.1 Na+/H+ antiporter subunit D -
  RJY17_RS06420 (RJY17_06420) - 1186465..1186941 (+) 477 WP_094032818.1 Na+/H+ antiporter subunit E -
  RJY17_RS06425 (RJY17_06425) - 1186941..1187225 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  RJY17_RS06430 (RJY17_06430) mnhG 1187209..1187583 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  RJY17_RS06435 (RJY17_06435) - 1187623..1188006 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  RJY17_RS06440 (RJY17_06440) comA 1188028..1188672 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  RJY17_RS06445 (RJY17_06445) comP 1188753..1191059 (-) 2307 WP_094032817.1 sensor histidine kinase Regulator
  RJY17_RS06450 (RJY17_06450) comX 1191078..1191254 (-) 177 WP_015240484.1 competence pheromone ComX -
  RJY17_RS06455 (RJY17_06455) - 1191269..1192144 (-) 876 WP_025285191.1 polyprenyl synthetase family protein -
  RJY17_RS06460 (RJY17_06460) degQ 1192296..1192436 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  RJY17_RS06465 (RJY17_06465) - 1192899..1193240 (+) 342 WP_007408677.1 hypothetical protein -
  RJY17_RS06470 (RJY17_06470) - 1193247..1194470 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89433.67 Da        Isoelectric Point: 8.2647

>NTDB_id=882874 RJY17_RS06445 WP_094032817.1 1188753..1191059(-) (comP) [Bacillus velezensis strain B5]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKIPTEENI
KGQYLAKAEHMKIIRDNHKIDLHNTEFISLNSSYSFFIYIIPCILFALSLLCIFYIYKVNRVKDTYSAYILIIFLLFTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYYHFLYQYFKELKIKFSSGYVVSALYILPVINIIIEIFQNHFAFQLVTNIN
LGTFFLEMMVVYTVIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGRYIYSAIVTSPFIIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIVPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFVKVTSEIGKII
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=882874 RJY17_RS06445 WP_094032817.1 1188753..1191059(-) (comP) [Bacillus velezensis strain B5]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTTGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTACAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAATACCGACAGAAGAGAATATA
AAAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATTATAAGGGATAACCATAAAATAGACCTACATAATACGGAATT
TATTTCCTTGAACAGCTCTTATAGCTTTTTTATTTATATTATCCCGTGCATATTGTTTGCTTTAAGCTTGTTGTGTATTT
TTTACATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTAATTATCTTTTTATTATTTACATCTATT
GCTTATTTAAGCGCAGGTGGAGTAACTAGAGGGTATGAAATAAACAGATATATTAACCTTTTTACGTTTTTGAATGTACC
TGTACTATACTATCACTTTCTTTATCAATATTTTAAAGAATTAAAAATAAAGTTTTCATCTGGTTATGTTGTGTCTGCTT
TATATATTTTGCCGGTTATTAATATAATAATTGAGATATTCCAAAACCATTTTGCTTTTCAACTTGTTACGAATATTAAT
TTAGGAACATTTTTTTTGGAAATGATGGTTGTTTACACGGTTATTATTTTTTATGGACTAGTCTATAGAAAAAAGGATCA
CTTTTATTTGTTGAAAGTGTTACTTATATCTAACACCATAGCTTTTTTCCCTTTTACAGTTTTTTATATTATACCTGAGG
TATTGTTCGGACGGTATATTTATTCTGCTATAGTGACGTCACCGTTTATAATTATTATTCCGTTAGCGTTAGTCTACCAA
TTCGTGGTCAATAAAATCTATGATATAGATTTTTTGTTAGGCAGAATCAGGTACTATGGTTTCCTTTCCATTGTTCCGAC
TATTGGAGTTGTTTGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGAAAGATTATT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTAAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCCGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGCCTGGTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAAC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.885

100

0.591