Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RKQ68_RS03260 Genome accession   NZ_CP134555
Coordinates   674552..674935 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain XH1044     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 669552..679935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKQ68_RS03250 (RKQ68_03260) - 672453..673571 (-) 1119 WP_001260821.1 efflux RND transporter periplasmic adaptor subunit -
  RKQ68_RS03255 (RKQ68_03265) - 673631..674269 (-) 639 WP_002027721.1 hypothetical protein -
  RKQ68_RS03260 (RKQ68_03270) pilG 674552..674935 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  RKQ68_RS03265 (RKQ68_03275) - 674959..675321 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  RKQ68_RS03270 (RKQ68_03280) - 675382..675918 (+) 537 WP_000729762.1 chemotaxis protein CheW -
  RKQ68_RS03275 (RKQ68_03285) - 675965..676831 (+) 867 Protein_626 chemotaxis protein -
  RKQ68_RS03280 (RKQ68_03290) - 676884..677348 (+) 465 WP_000678920.1 hypothetical protein -
  RKQ68_RS03285 (RKQ68_03295) dapE 677384..678520 (-) 1137 WP_001016581.1 succinyl-diaminopimelate desuccinylase -
  RKQ68_RS03290 (RKQ68_03300) - 678646..678789 (-) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  RKQ68_RS03295 (RKQ68_03305) - 678888..679796 (-) 909 WP_005138055.1 DUF1853 family protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=881280 RKQ68_RS03260 WP_000389061.1 674552..674935(+) (pilG) [Acinetobacter baumannii strain XH1044]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=881280 RKQ68_RS03260 WP_000389061.1 674552..674935(+) (pilG) [Acinetobacter baumannii strain XH1044]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37