Detailed information NTG0880980

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: B0E36_RS21905
• Genome accession: NZ_CP150879
• Coordinates: 5057607..5058893 (+)
• Length: 428 a.a.
• NCBI ID: WP_006137353.1
• Uniprot ID: A0A1G7BQJ2
• Organism: Streptomyces sp. MH191
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5052607..5063893

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B0E36_RS21875	-	5053320..5053514 (+)	195	WP_006137348.1	hypothetical protein	-
B0E36_RS21890	tig	5054156..5055556 (+)	1401	WP_191853060.1	trigger factor	-
B0E36_RS21895	clpP	5055984..5056604 (+)	621	WP_006137351.1	ATP-dependent Clp protease proteolytic subunit	Regulator
B0E36_RS21900	clpP	5056709..5057416 (+)	708	WP_093589359.1	ATP-dependent Clp protease proteolytic subunit	Regulator
B0E36_RS21905	clpX	5057607..5058893 (+)	1287	WP_006137353.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
B0E36_RS21910	-	5058998..5059987 (-)	990	WP_234527307.1	hypothetical protein	-
B0E36_RS21915	-	5060124..5062748 (+)	2625	WP_006137358.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46830.61 Da
• Isoelectric Point: 4.8249

>NTDB_id=880980 B0E36_RS21905 WP_006137353.1 5057607..5058893(+) (clpX) [Streptomyces sp. MH191]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELESKDQFQDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGPGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=880980 B0E36_RS21905 WP_006137353.1 5057607..5058893(+) (clpX) [Streptomyces sp. MH191]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCA
GCGAGGTGCGCTGGGAGGAGCTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGTTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCGATCGAACTCGCCAAGTCGAACATCCTCCTGCTGGGCCCCACCGGCTCCGGCAAGACCCTGCTGGCCCAGA
CGCTGGCCCGCATGCTCAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGGGACGTCTCCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCCACCATCCGCTCCAAGCGGGAGCTGGAGTCCAAGGACCAGTTCCAGGACGTCATGCCCG
AGGACCTCGTGAAGTTCGGCATGATCCCGGAGTTCATCGGCCGGCTCCCGGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGTCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGATCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCCGACGTCGTCCACTCCAACGTCAACCCGACGCTCATCCCGCGGGACGCCCGCGGGCGGGGCCCGGGGGAACAGAAGTC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A1G7BQJ2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523