Detailed information NTG0880516

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RHP70_RS17220
• Genome accession: NZ_CP134496
• Coordinates: 3334737..3335912 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus sp. SG20001
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3329737..3340912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHP70_RS17190 (RHP70_17190)	-	3329906..3330325 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
RHP70_RS17195 (RHP70_17195)	comFC	3330382..3331038 (-)	657	WP_231506847.1	ComF family protein	Machinery gene
RHP70_RS17200 (RHP70_17200)	-	3331065..3331358 (-)	294	WP_024426256.1	late competence development ComFB family protein	-
RHP70_RS17205 (RHP70_17205)	comFA	3331407..3332804 (-)	1398	WP_311165396.1	DEAD/DEAH box helicase	Machinery gene
RHP70_RS17210 (RHP70_17210)	-	3332925..3333767 (-)	843	WP_024423625.1	DegV family protein	-
RHP70_RS17215 (RHP70_17215)	degU	3333983..3334672 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
RHP70_RS17220 (RHP70_17220)	degS	3334737..3335912 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
RHP70_RS17225 (RHP70_17225)	-	3336134..3336802 (+)	669	WP_012011434.1	YigZ family protein	-
RHP70_RS17230 (RHP70_17230)	-	3336787..3337878 (+)	1092	WP_024423626.1	LCP family protein	-
RHP70_RS17235 (RHP70_17235)	-	3337914..3338981 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
RHP70_RS17240 (RHP70_17240)	tuaH	3339116..3340312 (-)	1197	WP_311165397.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=880516 RHP70_RS17220 WP_003213166.1 3334737..3335912(-) (degS) [Bacillus sp. SG20001]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=880516 RHP70_RS17220 WP_003213166.1 3334737..3335912(-) (degS) [Bacillus sp. SG20001]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGAAGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGGAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841