Detailed information NTG0880251

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: RJW54_RS00810
• Genome accession: NZ_CP134487
• Coordinates: 128752..129186 (+)
• Length: 144 a.a.
• NCBI ID: WP_029750050.1
• Uniprot ID: -
• Organism: Streptococcus suis strain MY1C3_3B
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 123752..134186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW54_RS00775 (RJW54_00775)	-	124494..124859 (+)	366	WP_024417409.1	DUF1033 family protein	-
RJW54_RS00780 (RJW54_00780)	-	124894..125844 (-)	951	WP_024417410.1	S66 peptidase family protein	-
RJW54_RS00785 (RJW54_00785)	comYA	125930..126880 (+)	951	WP_024417411.1	competence type IV pilus ATPase ComGA	Machinery gene
RJW54_RS00790 (RJW54_00790)	comYB	126792..127829 (+)	1038	WP_268866736.1	competence type IV pilus assembly protein ComGB	Machinery gene
RJW54_RS00795 (RJW54_00795)	comYC	127831..128112 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
RJW54_RS00800 (RJW54_00800)	comGD	128093..128500 (+)	408	WP_024394702.1	competence type IV pilus minor pilin ComGD	-
RJW54_RS00805 (RJW54_00805)	comYE	128472..128765 (+)	294	WP_024394703.1	competence type IV pilus minor pilin ComGE	Machinery gene
RJW54_RS00810 (RJW54_00810)	comGF/cglF	128752..129186 (+)	435	WP_029750050.1	competence type IV pilus minor pilin ComGF	Machinery gene
RJW54_RS00815 (RJW54_00815)	comGG	129164..129574 (+)	411	WP_024394705.1	competence type IV pilus minor pilin ComGG	-
RJW54_RS00820 (RJW54_00820)	comYH	129631..130584 (+)	954	WP_024394706.1	class I SAM-dependent methyltransferase	Machinery gene
RJW54_RS00825 (RJW54_00825)	-	130634..131821 (+)	1188	WP_014637319.1	acetate kinase	-
RJW54_RS00830 (RJW54_00830)	-	132136..132687 (+)	552	WP_014636756.1	folate family ECF transporter S component	-
RJW54_RS00835 (RJW54_00835)	-	132741..133997 (+)	1257	WP_024394707.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16507.85 Da
• Isoelectric Point: 8.8193

>NTDB_id=880251 RJW54_RS00810 WP_029750050.1 128752..129186(+) (comGF/cglF) [Streptococcus suis strain MY1C3_3B]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLIQEAHYQRQSVQKEWLVFSSQLRSEWDRSELVKVENGKVYVDKGG
QSLAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=880251 RJW54_RS00810 WP_029750050.1 128752..129186(+) (comGF/cglF) [Streptococcus suis strain MY1C3_3B]
TTGTTAAAAAGTAAAATTCCCGCTTTTACTCTCCTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAGTTGTTGATTCAAGAAGCACATTACCAACGTCAATCTGTCCAAAAGGAGTGGCTGGTATTTT
CTAGTCAGTTGCGGTCAGAGTGGGACCGGTCGGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAAGGTGGT
CAGTCGTTGGCCTTTGGTAAGTCACGATCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCAGGTGGACAGTGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGTATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (36-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae Rx1	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae D39	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae R6	56.738	97.917	0.556
comGF/cglF	Streptococcus mitis NCTC 12261	57.463	93.056	0.535
comGF/cglF	Streptococcus mitis SK321	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	50.694	100	0.507
comYF	Streptococcus mutans UA159	50	100	0.5
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451