Detailed information NTG0880199

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: RJW49_RS00775
• Genome accession: NZ_CP134477
• Coordinates: 125065..125499 (+)
• Length: 144 a.a.
• NCBI ID: WP_014735293.1
• Uniprot ID: -
• Organism: Streptococcus suis strain NLS40
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 120065..130499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW49_RS00740 (RJW49_00740)	-	120811..121176 (+)	366	WP_014735287.1	DUF1033 family protein	-
RJW49_RS00745 (RJW49_00745)	-	121211..122161 (-)	951	WP_014735288.1	S66 peptidase family protein	-
RJW49_RS00750 (RJW49_00750)	comGA	122247..123193 (+)	947	Protein_113	competence type IV pilus ATPase ComGA	-
RJW49_RS00755 (RJW49_00755)	comYB	123105..124142 (+)	1038	WP_268739958.1	competence type IV pilus assembly protein ComGB	Machinery gene
RJW49_RS00760 (RJW49_00760)	comYC	124144..124425 (+)	282	WP_074412254.1	competence type IV pilus major pilin ComGC	Machinery gene
RJW49_RS00765 (RJW49_00765)	comGD	124406..124813 (+)	408	WP_014735291.1	competence type IV pilus minor pilin ComGD	-
RJW49_RS00770 (RJW49_00770)	comYE	124785..125078 (+)	294	WP_024405248.1	competence type IV pilus minor pilin ComGE	Machinery gene
RJW49_RS00775 (RJW49_00775)	comGF/cglF	125065..125499 (+)	435	WP_014735293.1	competence type IV pilus minor pilin ComGF	Machinery gene
RJW49_RS00780 (RJW49_00780)	comGG	125477..125998 (+)	522	WP_014735294.1	competence type IV pilus minor pilin ComGG	-
RJW49_RS00785 (RJW49_00785)	comYH	126055..127008 (+)	954	WP_074393516.1	class I SAM-dependent methyltransferase	Machinery gene
RJW49_RS00790 (RJW49_00790)	-	127058..128245 (+)	1188	WP_012775422.1	acetate kinase	-
RJW49_RS00795 (RJW49_00795)	-	128560..129111 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
RJW49_RS00800 (RJW49_00800)	-	129167..130423 (+)	1257	WP_011921729.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16447.80 Da
• Isoelectric Point: 7.9752

>NTDB_id=880199 RJW49_RS00775 WP_014735293.1 125065..125499(+) (comGF/cglF) [Streptococcus suis strain NLS40]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISRENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=880199 RJW49_RS00775 WP_014735293.1 125065..125499(+) (comGF/cglF) [Streptococcus suis strain NLS40]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTACCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGCGAA
CAGGCTTTGGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCGAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA140	49.306	100	0.493
comYF	Streptococcus mutans UA159	48.611	100	0.486
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458