Detailed information NTG0878196

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: WOC69_RS00100
• Genome accession: NZ_CP150744
• Coordinates: 13221..13823 (+)
• Length: 200 a.a.
• NCBI ID: WP_000271550.1
• Uniprot ID: P66748
• Organism: Staphylococcus aureus strain TUM22702
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 8221..18823

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WOC69_RS00060 (WOC69_00060)	-	8237..8356 (+)	120	WP_000840602.1	hypothetical protein	-
WOC69_RS00065 (WOC69_00065)	mreC	8555..9397 (+)	843	WP_000911041.1	rod shape-determining protein MreC	-
WOC69_RS00070 (WOC69_00070)	mreD	9397..9927 (+)	531	WP_001259925.1	rod shape-determining protein MreD	-
WOC69_RS00075 (WOC69_00075)	rplU	10163..10471 (+)	309	WP_000457386.1	50S ribosomal protein L21	-
WOC69_RS00080 (WOC69_00080)	-	10477..10797 (+)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
WOC69_RS00085 (WOC69_00085)	rpmA	10809..11093 (+)	285	WP_000916187.1	50S ribosomal protein L27	-
WOC69_RS00090 (WOC69_00090)	obgE	11447..12739 (+)	1293	WP_000496100.1	GTPase ObgE	-
WOC69_RS00095 (WOC69_00095)	-	12752..13207 (+)	456	WP_000368902.1	ACT domain-containing protein	-
WOC69_RS00100 (WOC69_00100)	ruvA	13221..13823 (+)	603	WP_000271550.1	Holliday junction branch migration protein RuvA	Machinery gene
WOC69_RS00105 (WOC69_00105)	ruvB	13855..14859 (+)	1005	WP_001005768.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
WOC69_RS00110 (WOC69_00110)	queA	14861..15886 (+)	1026	WP_001019178.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
WOC69_RS00115 (WOC69_00115)	tgt	15909..17048 (+)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
WOC69_RS00120 (WOC69_00120)	yajC	17067..17327 (+)	261	WP_001160682.1	preprotein translocase subunit YajC	-
WOC69_RS00125 (WOC69_00125)	-	17449..18621 (-)	1173	WP_000195429.1	IS256-like element IS256 family transposase	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22281.50 Da
• Isoelectric Point: 6.1244

>NTDB_id=878196 WOC69_RS00100 WP_000271550.1 13221..13823(+) (ruvA) [Staphylococcus aureus strain TUM22702]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIRTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=878196 WOC69_RS00100 WP_000271550.1 13221..13823(+) (ruvA) [Staphylococcus aureus strain TUM22702]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCGTACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGTATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTTACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATCA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (156-197)

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA N terminal domain (RuvA_N) (1-61)

3D structure

• AlphaFold DB: P66748

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	46.231	99.5	0.46
ruvA	Streptococcus pneumoniae R6	45.729	99.5	0.455
ruvA	Streptococcus pneumoniae D39	45.729	99.5	0.455
ruvA	Bacillus subtilis subsp. subtilis str. 168	43.216	99.5	0.43