Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   RDV49_RS05065 Genome accession   NZ_CP133988
Coordinates   1070349..1071353 (+) Length   334 a.a.
NCBI ID   WP_003005429.1    Uniprot ID   A0A930RQ81
Organism   Streptococcus parasanguinis strain B-1756     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1065349..1076353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV49_RS05050 (RDV49_05050) - 1067462..1068304 (+) 843 WP_003008170.1 metallophosphoesterase -
  RDV49_RS05055 (RDV49_05055) - 1068416..1068865 (+) 450 WP_003008168.1 Rrf2 family transcriptional regulator -
  RDV49_RS05060 (RDV49_05060) - 1069106..1070188 (-) 1083 WP_003008166.1 Xaa-Pro peptidase family protein -
  RDV49_RS05065 (RDV49_05065) ccpA 1070349..1071353 (+) 1005 WP_003005429.1 catabolite control protein A Regulator
  RDV49_RS05070 (RDV49_05070) - 1071495..1072493 (+) 999 WP_003008161.1 glycosyltransferase family 4 protein -
  RDV49_RS05075 (RDV49_05075) - 1072495..1073817 (+) 1323 WP_003008160.1 glycosyltransferase family 4 protein -
  RDV49_RS05080 (RDV49_05080) thrS 1074171..1076114 (+) 1944 WP_003008158.1 threonine--tRNA ligase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37095.20 Da        Isoelectric Point: 6.9973

>NTDB_id=878163 RDV49_RS05065 WP_003005429.1 1070349..1071353(+) (ccpA) [Streptococcus parasanguinis strain B-1756]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNNLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTQLAKHNKKIAFVSGPLVDDINGKIRLTGYKEALKAKKLSYSEGLVFESKYRYDEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLSDKGIKVPEDFEIITSDDSQVTRYTRPNLSTIGQPLYDLGAISMRMLTKIMHKEELEEREV
LLSHTINQRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=878163 RDV49_RS05065 WP_003005429.1 1070349..1071353(+) (ccpA) [Streptococcus parasanguinis strain B-1756]
ATGAATACAGACGATACAGTAACAATTTATGATGTCGCCCGTGAAGCAGGGGTTTCAATGGCAACCGTTAGTCGTGTAGT
AAATGGGAATAAAAACGTTAAAGAAAATACACGTAAAAAAGTTTTAGAAGTGATCGAACGCTTGGATTACCGTCCAAATG
CTGTTGCGCGTGGTCTTGCTAGCAAGAAAACAACAACAGTCGGTGTTGTGATTCCAAACATCACGAATAGCTATTTCTCT
ACATTGGCTAAGGGGATCGATGACATTGCTGAAATGTACAAGTACAATATTGTTCTTGCAAATAGCGATGAAGACGATGA
CAAAGAAGTTTCAGTTGTAAACAACCTCTTTTCAAAACAAGTGGATGGGATCATTTTCATGGGCTATCATTTGACAGAAA
AGATTCGCTCAGAATTTTCACGCTCTCGGACGCCAGTTGTCCTTGCTGGTACAGTGGATGTTGAACACCAATTGCCAAGT
GTCAATATTGACTACAAGCAAGCGACTGTGGATGCTGTTACACAGTTGGCAAAACACAACAAGAAAATTGCTTTTGTAAG
TGGCCCATTGGTGGATGATATCAATGGAAAAATTCGTTTGACAGGCTACAAAGAAGCTTTAAAAGCGAAAAAATTGAGCT
ATAGCGAAGGGCTTGTCTTTGAATCCAAGTACCGTTACGATGAAGGTTATAACTTGGCAGAACGCATCATTGCGTCAAAA
GCAACAGCTGCCTTTGTAACAGGGGATGAATTGGCTGCAGGGCTCTTGAACGGCTTGTCTGATAAGGGAATCAAGGTACC
AGAAGACTTTGAAATTATTACCAGCGATGATTCACAAGTAACTCGTTACACGCGTCCAAATCTATCAACGATTGGCCAAC
CCTTGTATGACCTTGGTGCGATCAGTATGCGCATGTTGACCAAGATCATGCACAAAGAAGAGTTGGAAGAACGCGAAGTG
TTGTTGTCTCATACGATCAACCAACGTGGAACGACCAAAAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(180-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.018

100

0.91
  ccpA Streptococcus pneumoniae D39

85.329

100

0.853
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.798

99.102

0.563