Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RDV49_RS00750 Genome accession   NZ_CP133988
Coordinates   167836..169095 (-) Length   419 a.a.
NCBI ID   WP_003009974.1    Uniprot ID   -
Organism   Streptococcus parasanguinis strain B-1756     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 162836..174095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV49_RS00735 (RDV49_00735) - 164591..164878 (-) 288 WP_003009979.1 WXG100 family type VII secretion target -
  RDV49_RS00740 (RDV49_00740) - 165355..165915 (+) 561 WP_003009977.1 hypothetical protein -
  RDV49_RS00745 (RDV49_00745) - 165970..167820 (-) 1851 WP_003009975.1 proline--tRNA ligase -
  RDV49_RS00750 (RDV49_00750) eeP 167836..169095 (-) 1260 WP_003009974.1 RIP metalloprotease RseP Regulator
  RDV49_RS00755 (RDV49_00755) - 169132..169935 (-) 804 WP_023919527.1 phosphatidate cytidylyltransferase -
  RDV49_RS00760 (RDV49_00760) - 169945..170694 (-) 750 WP_003009971.1 isoprenyl transferase -
  RDV49_RS00765 (RDV49_00765) yajC 170850..171176 (-) 327 WP_003009970.1 preprotein translocase subunit YajC -
  RDV49_RS00770 (RDV49_00770) - 171321..171566 (-) 246 WP_003009969.1 hypothetical protein -
  RDV49_RS00775 (RDV49_00775) clpC 171791..173920 (-) 2130 WP_003009968.1 AAA family ATPase Regulator

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45912.43 Da        Isoelectric Point: 8.2418

>NTDB_id=878137 RDV49_RS00750 WP_003009974.1 167836..169095(-) (eeP) [Streptococcus parasanguinis strain B-1756]
MQFIAFIVIFGVIVLVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGQDGTAYTIRILPLGGYVRMAGWGEDTTEIKTG
TPVSLTLNEAGKVVRINLSGKNLDQTALPMNVTQFDFEDKLEITGLVLDETKTYSVDHDATIVEEDGTEVRIAPRDVQYQ
NASIWGRLITNFAGPMNNFILSIVVYSLLAFMRGGAIDYYSNNVQVAPDGALAKVGVKSNVQILQVNNDTVSNWDELTDA
VEKATKDSKTAPKLTLKVKTDGQEKEVKVKPTKSGNRYYLGVTNGLKTGFVDKLLSGFTDTWNTATRILGALKDIIFHFS
LNKLGGPVAIYNASSQAAQLGIPAVLSLMAMLSINIGIFNLIPIPALDGGKILINLIEVVRRKPLKQEVETYMTLAGVAV
MVILMIAVTWNDIMKLFLK

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=878137 RDV49_RS00750 WP_003009974.1 167836..169095(-) (eeP) [Streptococcus parasanguinis strain B-1756]
ATGCAGTTTATTGCCTTTATTGTTATTTTTGGAGTGATCGTTCTCGTTCACGAGTTTGGTCATTTCTATTTTGCAAAAAA
ATCGGGCATCCTGGTGCGAGAATTCTCGATTGGGATGGGTCCCAAGATCTTTGCCCATATTGGTCAAGATGGAACAGCCT
ATACGATTCGCATTCTACCTTTAGGTGGCTATGTTCGTATGGCTGGCTGGGGTGAGGATACAACTGAGATTAAAACCGGA
ACGCCTGTCAGCTTGACGCTAAATGAGGCTGGCAAGGTCGTCCGGATCAATCTTTCAGGAAAGAATCTGGATCAGACAGC
CCTTCCCATGAATGTTACCCAGTTTGACTTTGAAGACAAACTGGAAATTACGGGTTTGGTTCTCGATGAGACCAAGACTT
ATAGTGTTGATCATGATGCGACCATCGTTGAGGAAGATGGGACAGAAGTGCGGATTGCGCCGAGAGATGTTCAGTATCAG
AATGCCAGCATTTGGGGACGGTTGATCACCAACTTTGCGGGTCCTATGAACAACTTTATCCTCAGTATTGTCGTCTATTC
ACTCTTAGCCTTTATGCGCGGTGGTGCGATTGACTACTACAGCAACAATGTTCAGGTGGCACCTGATGGGGCGTTGGCTA
AGGTCGGTGTCAAAAGCAATGTTCAGATCCTTCAAGTCAACAACGACACCGTTAGCAACTGGGATGAGCTGACAGATGCT
GTCGAAAAAGCAACCAAGGACAGCAAGACGGCTCCTAAATTGACCCTGAAAGTCAAAACAGACGGCCAAGAAAAAGAAGT
CAAAGTGAAGCCAACCAAGTCAGGGAATCGTTACTATCTGGGTGTGACAAACGGCCTCAAGACTGGATTTGTGGATAAAC
TCTTGTCTGGTTTTACAGATACCTGGAATACAGCGACACGGATTTTGGGAGCTTTGAAAGATATCATTTTCCACTTCAGT
CTCAATAAACTGGGTGGTCCGGTTGCCATCTACAATGCCAGCTCACAAGCTGCTCAATTAGGGATTCCAGCAGTCTTGTC
TCTTATGGCCATGCTCTCTATTAATATTGGGATCTTCAATCTAATCCCGATTCCAGCTTTGGATGGGGGTAAAATCTTGA
TCAATTTGATCGAGGTCGTCCGGAGAAAGCCACTGAAACAGGAAGTAGAAACCTATATGACGCTTGCAGGTGTAGCTGTA
ATGGTTATTTTGATGATTGCTGTCACCTGGAATGATATTATGAAATTATTTTTGAAATAG

Domains


Predicted by InterproScan.

(5-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

66.106

99.284

0.656

  eeP Streptococcus thermophilus LMD-9

65.865

99.284

0.654