Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   RIM64_RS03210 Genome accession   NZ_CP133951
Coordinates   644322..645323 (+) Length   333 a.a.
NCBI ID   WP_012677612.1    Uniprot ID   A0A6M1KZY1
Organism   Streptococcus equi subsp. zooepidemicus strain JMC111     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 639322..650323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIM64_RS03190 (RIM64_03190) smpB 640245..640712 (+) 468 WP_165619259.1 SsrA-binding protein SmpB -
  RIM64_RS03195 (RIM64_03195) - 640996..641922 (-) 927 WP_111710700.1 glycosyltransferase family 2 protein -
  RIM64_RS03200 (RIM64_03200) - 642037..642705 (-) 669 WP_115266733.1 NAD(P)H-dependent oxidoreductase -
  RIM64_RS03205 (RIM64_03205) - 643063..644148 (-) 1086 WP_038674132.1 Xaa-Pro peptidase family protein -
  RIM64_RS03210 (RIM64_03210) ccpA 644322..645323 (+) 1002 WP_012677612.1 catabolite control protein A Regulator
  RIM64_RS03215 (RIM64_03215) - 645393..646868 (+) 1476 WP_165619258.1 alpha-amylase -
  RIM64_RS03220 (RIM64_03220) - 647153..648151 (+) 999 WP_115266735.1 glycosyltransferase family 4 protein -
  RIM64_RS03225 (RIM64_03225) - 648153..649487 (+) 1335 WP_165619257.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36617.72 Da        Isoelectric Point: 5.7618

>NTDB_id=877703 RIM64_RS03210 WP_012677612.1 644322..645323(+) (ccpA) [Streptococcus equi subsp. zooepidemicus strain JMC111]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFDLAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=877703 RIM64_RS03210 WP_012677612.1 644322..645323(+) (ccpA) [Streptococcus equi subsp. zooepidemicus strain JMC111]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATCCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATCGTTCTTGCTTCAAGCGATGAGGACGACGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGATTTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGCAAGCGTGTTCC
AGAGGACTTTGAGATTATTACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGTCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M1KZY1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547