Detailed information NTG0876777

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: RHM55_RS11120
• Genome accession: NZ_CP133784
• Coordinates: 2376511..2377854 (+)
• Length: 447 a.a.
• NCBI ID: WP_322181988.1
• Uniprot ID: A0AAU0UG11
• Organism: Pseudomonas sp. MH9.2
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2371511..2382854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHM55_RS11095 (RHM55_11095)	pgeF	2371691..2372413 (-)	723	WP_322182868.1	peptidoglycan editing factor PgeF	-
RHM55_RS11100 (RHM55_11100)	rluD	2372422..2373384 (-)	963	WP_219062582.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
RHM55_RS11105 (RHM55_11105)	-	2373534..2374550 (+)	1017	WP_322181984.1	outer membrane protein assembly factor BamD	-
RHM55_RS11110 (RHM55_11110)	-	2374669..2374929 (+)	261	WP_322182870.1	PP0621 family protein	-
RHM55_RS11115 (RHM55_11115)	pilS	2374919..2376508 (+)	1590	WP_322181986.1	sensor histidine kinase	Regulator
RHM55_RS11120 (RHM55_11120)	pilR	2376511..2377854 (+)	1344	WP_322181988.1	sigma-54 dependent transcriptional regulator	Regulator
RHM55_RS11125 (RHM55_11125)	thiO	2378008..2379111 (-)	1104	WP_322181990.1	glycine oxidase ThiO	-
RHM55_RS11130 (RHM55_11130)	-	2379139..2379561 (-)	423	WP_322181993.1	type IV pilin protein	-
RHM55_RS11135 (RHM55_11135)	-	2379574..2382663 (-)	3090	WP_322181995.1	pilus assembly protein	-

Sequence

Protein

• Length: 447 a.a.
• Molecular weight: 50072.19 Da
• Isoelectric Point: 6.1353

>NTDB_id=876777 RHM55_RS11120 WP_322181988.1 2376511..2377854(+) (pilR) [Pseudomonas sp. MH9.2]
MSTRQKILIVDDEPDIRELLEITLGRMKLDTRSARNVKEARDWLLREPFDLCLTDMRMPDGNGLELVQHIQQRHPQVPVA
MITAYGSLDTAINALKAGAFDFLTKPVDLTLLRELVTSALRLHPPTTTDSSSIDSRLLGNSPPMRALRNQISKLARSQAP
IYISGESGSGKELVARLIHEQGPRISQPFIPVNCGAIPSELMESEFFGHRKGSFSGAVEDKPGLFQAANGGTLFLDEVAD
LPLAMQVKLLRVIQEKAVRCVGGQQELVVDVRILCATHKDLSAEVAAGRFRQDLYYRLNVIELRVPSLRERREDIGQLAD
NVLRRLSDGSGQPEAKLNAHALDTLKNYRFPGNVRELENILERAYTLCDNDQIDASDLRLADSPSAHDPDGPNLAEIDNL
EDYLESVERKLILQALEETRWNRTAAAQRLNLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1344 bp

>NTDB_id=876777 RHM55_RS11120 WP_322181988.1 2376511..2377854(+) (pilR) [Pseudomonas sp. MH9.2]
ATGAGCACACGGCAAAAAATCCTGATCGTCGACGATGAACCGGATATCCGCGAACTTCTGGAGATCACGCTGGGGCGGAT
GAAGCTCGACACCCGCAGCGCGCGCAACGTCAAAGAAGCGCGTGACTGGCTGCTGCGCGAGCCTTTCGACCTGTGCCTGA
CGGACATGCGCATGCCCGATGGCAATGGCCTGGAGCTGGTGCAGCACATCCAGCAACGTCACCCGCAGGTGCCAGTGGCG
ATGATTACAGCGTATGGGAGCCTCGACACCGCTATCAATGCACTAAAAGCCGGGGCCTTCGACTTTTTGACTAAACCGGT
GGACCTCACCCTCCTCCGCGAACTGGTGACCAGCGCCCTGCGCCTGCACCCCCCGACCACAACTGACAGCAGCAGCATCG
ACAGCCGCTTGCTGGGCAACTCGCCGCCCATGCGTGCACTGCGCAACCAGATCAGCAAACTGGCCCGCAGTCAGGCTCCG
ATCTACATCAGTGGCGAATCGGGCAGCGGCAAAGAGCTAGTGGCACGCTTGATTCACGAGCAAGGTCCGCGCATCAGCCA
ACCCTTTATTCCGGTCAACTGCGGCGCCATTCCTTCTGAACTCATGGAAAGCGAGTTCTTCGGCCATCGTAAAGGTAGCT
TCAGCGGTGCGGTCGAGGACAAGCCCGGATTGTTTCAGGCTGCCAACGGCGGGACGCTGTTCCTTGATGAAGTCGCAGAC
CTGCCGTTGGCCATGCAGGTCAAGTTACTGCGCGTGATCCAGGAAAAAGCCGTGCGCTGCGTGGGTGGACAGCAAGAGTT
GGTGGTGGACGTGCGCATTCTCTGCGCGACCCACAAAGACCTGAGCGCCGAAGTCGCTGCCGGGCGTTTCCGCCAGGATT
TGTATTACCGCCTGAACGTCATCGAACTGCGCGTACCGTCCTTGCGCGAGCGCCGGGAAGACATCGGCCAACTCGCCGAT
AACGTCCTCCGACGCCTGTCCGACGGCTCGGGTCAGCCTGAGGCGAAGCTCAACGCACACGCGCTGGACACCCTGAAAAA
CTATCGATTCCCAGGCAATGTGCGCGAGCTTGAAAACATACTCGAACGCGCCTACACCCTGTGCGACAACGACCAGATCG
ACGCCAGCGACCTGCGCCTGGCCGACTCACCCAGCGCCCACGACCCCGACGGCCCCAACCTGGCCGAGATCGACAACCTG
GAAGACTACCTGGAAAGCGTCGAACGCAAACTCATCCTCCAGGCCCTGGAAGAAACCCGCTGGAACCGCACCGCCGCCGC
CCAACGCCTGAACCTGACGTTTCGGTCCATGCGCTATCGGCTGAAAAAGTTGGGGCTGGATTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (137-303)

• Bacterial regulatory protein, Fis family (HTH_8) (404-444)

• Response regulator receiver domain (Response_reg) (7-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	80.899	99.553	0.805
pilR	Acinetobacter baumannii strain A118	47.93	100	0.492