Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   RGQ10_RS12290 Genome accession   NZ_CP133760
Coordinates   2438225..2440576 (-) Length   783 a.a.
NCBI ID   WP_269800792.1    Uniprot ID   -
Organism   Bacillus velezensis strain F37     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2433225..2445576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RGQ10_RS12250 (RGQ10_12250) - 2433685..2434116 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  RGQ10_RS12255 (RGQ10_12255) - 2434116..2434457 (+) 342 WP_014418758.1 Na(+)/H(+) antiporter subunit C -
  RGQ10_RS12260 (RGQ10_12260) - 2434450..2435931 (+) 1482 WP_014418759.1 Na+/H+ antiporter subunit D -
  RGQ10_RS12265 (RGQ10_12265) - 2435937..2436413 (+) 477 WP_014418760.1 Na+/H+ antiporter subunit E -
  RGQ10_RS12270 (RGQ10_12270) - 2436413..2436697 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  RGQ10_RS12275 (RGQ10_12275) mnhG 2436681..2437055 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  RGQ10_RS12280 (RGQ10_12280) - 2437095..2437478 (-) 384 WP_014418761.1 hotdog fold thioesterase -
  RGQ10_RS12285 (RGQ10_12285) comA 2437500..2438144 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  RGQ10_RS12290 (RGQ10_12290) comP 2438225..2440576 (-) 2352 WP_269800792.1 sensor histidine kinase Regulator
  RGQ10_RS12295 (RGQ10_12295) comX 2440554..2440724 (-) 171 WP_032863917.1 competence pheromone ComX -
  RGQ10_RS12300 (RGQ10_12300) - 2440724..2441629 (-) 906 WP_014418764.1 polyprenyl synthetase family protein -
  RGQ10_RS12305 (RGQ10_12305) degQ 2441781..2441921 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  RGQ10_RS12310 (RGQ10_12310) - 2442387..2442728 (+) 342 WP_014418765.1 hypothetical protein -
  RGQ10_RS12315 (RGQ10_12315) - 2442735..2443958 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  RGQ10_RS12320 (RGQ10_12320) - 2444088..2445554 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 783 a.a.        Molecular weight: 90764.00 Da        Isoelectric Point: 9.0674

>NTDB_id=876456 RGQ10_RS12290 WP_269800792.1 2438225..2440576(-) (comP) [Bacillus velezensis strain F37]
MTQLGLLKKQESCGSLRQLLKCFTVALLLFGIFYFTFIIYYTQNGILIGTKVVQSSNQELKVVDISKSSYGRIMGLKIGD
RITEINGGKPKKENIYGSYLAKIKYLKVERDGRLIELKNIEFIYLDSPYSFFSYIIPCIFFLLSLICIFYIFKVNLRKDS
VSAYILICFLLCISIAYLSAGGVTRGYRINRYINLYTFLAVPVLYLNFLHQYFKELKVKFSRGIYVGLLYLLPLINILLE
LFRDRIGHHLIVSLNLLTFLLEMIVVYVSLILYQIKHRKKDFSYLLKVLLVSNTIAFLPFSLLYIAPLIIFGQYVYSAVV
TAPFLLLIPLALVYQFVVNKIYNIDFLLGRLRYYCLLAVIPTIGIVWVFVVFINKNKNFDTFQITLFVFLIMLAVFYFKE
VLDFKFRLKRFSEKYNYQDSIFKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPY
KKEFDKVTSEIGKIIEVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQD
LKQQGSNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMT
RETCHELRPQLLYDLGLVKAVSKLTAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLI
SIQNKVILHYEDDGVGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2352 bp        

>NTDB_id=876456 RGQ10_RS12290 WP_269800792.1 2438225..2440576(-) (comP) [Bacillus velezensis strain F37]
ATGACCCAGCTTGGTTTACTTAAAAAACAAGAGAGTTGTGGTTCCTTGAGACAATTGCTGAAATGTTTTACGGTTGCTTT
ATTATTGTTCGGAATTTTTTATTTTACTTTTATAATTTATTATACTCAGAATGGAATATTAATAGGAACAAAAGTAGTTC
AGTCTTCTAACCAAGAATTAAAAGTTGTGGATATTTCAAAATCTTCTTATGGAAGAATAATGGGTCTAAAAATTGGGGAC
AGAATTACTGAAATAAATGGCGGAAAACCTAAAAAAGAAAATATTTATGGTTCATACCTTGCGAAAATTAAGTATTTAAA
AGTTGAGAGAGACGGGCGTTTAATAGAACTTAAAAATATTGAATTCATTTATTTAGATAGTCCATATAGTTTCTTTTCGT
ATATTATTCCGTGTATCTTTTTTCTTCTTAGTTTAATATGCATATTTTATATATTTAAAGTCAACCTAAGAAAAGATAGC
GTCTCAGCGTATATTCTTATTTGCTTTTTACTGTGTATTTCTATTGCATACTTAAGCGCAGGAGGGGTTACAAGAGGTTA
TCGTATTAATAGGTACATTAATCTTTACACCTTTTTAGCTGTGCCTGTTTTATATCTAAATTTCTTGCATCAATATTTCA
AAGAACTTAAAGTGAAATTTTCGAGAGGAATTTACGTTGGTTTATTGTACCTTCTTCCTCTAATTAATATCCTGCTTGAA
TTATTTAGAGATAGAATAGGTCATCATTTAATTGTAAGCCTTAACCTTTTAACATTTTTATTAGAAATGATTGTAGTTTA
TGTTAGTCTCATATTATATCAAATAAAACATAGAAAAAAGGATTTCTCTTACCTGTTAAAAGTACTTCTGGTTTCTAATA
CAATTGCTTTTTTACCCTTTTCTTTATTATATATTGCTCCATTGATTATTTTTGGACAATATGTATATAGCGCTGTAGTT
ACTGCACCTTTTCTTCTGCTCATACCTTTAGCATTGGTATATCAATTTGTCGTAAATAAGATTTACAACATTGATTTCTT
GTTAGGCCGTTTGAGGTATTATTGCTTGTTAGCAGTTATTCCGACGATAGGAATCGTTTGGGTATTTGTAGTATTCATCA
ACAAAAATAAAAATTTTGACACTTTCCAAATTACATTGTTTGTATTTCTAATCATGCTAGCCGTTTTTTATTTCAAAGAA
GTTCTAGACTTTAAGTTTCGCTTAAAGCGTTTCTCTGAAAAATACAATTACCAAGACAGCATATTTAAATATACACAGCT
TCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAAAAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAG
CTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTGATAAACAGAACAGTGAACCGAACTGGCAGCCGTAT
AAAAAAGAATTTGATAAAGTCACATCAGAGATTGGCAAGATTATTGAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGA
AAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAATACTCCAAGACTGACAAGAGATGAGATATCTTGGT
TAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATATTGCAGATCGAAGAACTCATGAACCATTTACAAGAT
CTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGC
CCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGA
AAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGTCGGATGTCATTTTGATGACC
CGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCGGTGTCCAAGCTTACCGCACA
GCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCTGGATTTGGATACACAGCTGA
ATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATC
AGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGAT
GAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGACGGACGGATGAAAATCGACACAAGTGAAGGAAACG
GTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(583-652)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

61.219

98.467

0.603