Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   TOL5_RS18120 Genome accession   NZ_AP024708
Coordinates   3917493..3917876 (-) Length   127 a.a.
NCBI ID   WP_004827613.1    Uniprot ID   A0A0A8TKL3
Organism   Acinetobacter sp. Tol 5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3912493..3922876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TOL5_RS18105 (TOL5_35760) - 3914452..3916521 (-) 2070 WP_004827618.1 methyl-accepting chemotaxis protein -
  TOL5_RS18110 (TOL5_35770) - 3916564..3917100 (-) 537 WP_004827616.1 chemotaxis protein CheW -
  TOL5_RS18115 (TOL5_35780) - 3917104..3917472 (-) 369 WP_004827615.1 response regulator -
  TOL5_RS18120 (TOL5_35790) pilG 3917493..3917876 (-) 384 WP_004827613.1 twitching motility response regulator PilG Regulator
  TOL5_RS18125 (TOL5_35800) - 3918161..3918802 (+) 642 WP_171496514.1 hypothetical protein -
  TOL5_RS18130 (TOL5_35810) - 3919051..3920781 (+) 1731 WP_151781310.1 proline--tRNA ligase -
  TOL5_RS18135 (TOL5_35820) - 3921209..3922168 (-) 960 WP_151779752.1 DUF6160 family protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14213.27 Da        Isoelectric Point: 4.7172

>NTDB_id=87598 TOL5_RS18120 WP_004827613.1 3917493..3917876(-) (pilG) [Acinetobacter sp. Tol 5]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=87598 TOL5_RS18120 WP_004827613.1 3917493..3917876(-) (pilG) [Acinetobacter sp. Tol 5]
ATGGACGATAAATTTCAAAATCTTAAAGTCATGGTGATCGATGATTCTAAAACCATTCGTCGTACTGCTGAAACATTATT
ACAAAGAGAAGGTTGTGAAGTAGTTACTGCGGTAGATGGTTTTGAAGCCTTGTCTAAGATTGCTGAAGCTAATCCAGATA
TCGTTTTTGTTGATATTATGATGCCTCGTTTGGATGGTTATCAAACCTGTGCATTGATTAAAAATTCTCAAAATTATCAA
AATATTCCAGTCATTATGCTATCAAGCAAAGATGGCTTATTTGATCAAGCAAAGGGTCGAGTTGTCGGTTCTGATGAATA
TTTAACCAAACCATTTAGTAAAGATGAATTATTGAATGCAATTCGCAACCATGTGAGTGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8TKL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment