Detailed information NTG0875865

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: RFN65_RS18985
• Genome accession: NZ_CP133703
• Coordinates: 3668570..3669718 (-)
• Length: 382 a.a.
• NCBI ID: WP_251218015.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain CP35
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3663570..3674718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFN65_RS18955 (RFN65_18955)	yclO	3664288..3665235 (-)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-
RFN65_RS18960 (RFN65_18960)	ceuB	3665228..3666178 (-)	951	WP_015382768.1	petrobactin ABC transporter permease YclN	Machinery gene
RFN65_RS18965 (RFN65_18965)	thrD	3666563..3667927 (+)	1365	WP_063336058.1	aspartate kinase	-
RFN65_RS18970 (RFN65_18970)	yczN	3668080..3668193 (+)	114	WP_014478831.1	YjcZ family sporulation protein	-
RFN65_RS18975 (RFN65_18975)	yczM	3668275..3668364 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
RFN65_RS18980 (RFN65_18980)	phrC	3668464..3668586 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
RFN65_RS18985 (RFN65_18985)	rapC	3668570..3669718 (-)	1149	WP_251218015.1	response regulator aspartate phosphatase RapC	Regulator
RFN65_RS18990 (RFN65_18990)	yclK	3669882..3671303 (-)	1422	WP_080467384.1	two-component system sensor histidine kinase YclK	-
RFN65_RS18995 (RFN65_18995)	yclJ	3671290..3671973 (-)	684	WP_063336130.1	two-component system response regulator YclJ	-
RFN65_RS19000 (RFN65_19000)	yclI	3672185..3673651 (+)	1467	WP_309529871.1	ABC transporter permease	-
RFN65_RS19005 (RFN65_19005)	yclH	3673667..3674347 (+)	681	WP_032726533.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45663.72 Da
• Isoelectric Point: 5.0423

>NTDB_id=875865 RFN65_RS18985 WP_251218015.1 3668570..3669718(-) (rapC) [Bacillus subtilis strain CP35]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKKKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=875865 RFN65_RS18985 WP_251218015.1 3668570..3669718(-) (rapC) [Bacillus subtilis strain CP35]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCCTTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAAGAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568