Detailed information NTG0875453

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RFF16_RS08880
• Genome accession: NZ_CP133642
• Coordinates: 1910789..1911910 (+)
• Length: 373 a.a.
• NCBI ID: WP_010907243.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain Past3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1905789..1916910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFF16_RS08860 (RFF16_08855)	napG	1907967..1908719 (+)	753	WP_005718376.1	ferredoxin-type protein NapG	-
RFF16_RS08865 (RFF16_08860)	napH	1908719..1909594 (+)	876	WP_005757794.1	quinol dehydrogenase ferredoxin subunit NapH	-
RFF16_RS08870 (RFF16_08865)	-	1909600..1910025 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RFF16_RS08875 (RFF16_08870)	-	1910041..1910634 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RFF16_RS08880 (RFF16_08875)	dprA	1910789..1911910 (+)	1122	WP_010907243.1	DNA-processing protein DprA	Machinery gene
RFF16_RS08885 (RFF16_08880)	lptD	1912016..1914364 (-)	2349	WP_310843083.1	LPS assembly protein LptD	-
RFF16_RS08890 (RFF16_08885)	-	1914428..1914979 (-)	552	WP_010907245.1	DNA-3-methyladenine glycosylase I	-
RFF16_RS08895 (RFF16_08890)	tal	1915137..1916090 (+)	954	WP_010907246.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41580.65 Da
• Isoelectric Point: 6.0986

>NTDB_id=875453 RFF16_RS08880 WP_010907243.1 1910789..1911910(+) (dprA) [Pasteurella multocida strain Past3]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSPAELMEYDTKAFQQIGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALSHTENAFSQQVTDTSTINTARITP
EHPELYAQIGYMPVSIDVLAQQVNLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=875453 RFF16_RS08880 WP_010907243.1 1910789..1911910(+) (dprA) [Pasteurella multocida strain Past3]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAATTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTAGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCCCCTGTGGCAGAAAATTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTGTCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGTCTCATACGGAGAACGCCTTTTCTCAACAAGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCCAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATCTACCTAT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.811	99.196	0.603
dprA	Glaesserella parasuis strain SC1401	53.143	93.834	0.499
dprA	Vibrio cholerae strain A1552	45.946	99.196	0.456
dprA	Vibrio campbellii strain DS40M4	45.135	99.196	0.448
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394