Detailed information NTG0875301

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: WJM95_RS10640
• Genome accession: NZ_CP149798
• Coordinates: 2415862..2417148 (-)
• Length: 428 a.a.
• NCBI ID: WP_151471405.1
• Uniprot ID: A0A7J5DDX9
• Organism: Streptomyces sp. f51
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2410862..2422148

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WJM95_RS10630 (WJM95_10630)	-	2411586..2414210 (-)	2625	WP_339129344.1	valine--tRNA ligase	-
WJM95_RS10635 (WJM95_10635)	-	2414348..2415286 (+)	939	WP_339129345.1	hypothetical protein	-
WJM95_RS10640 (WJM95_10640)	clpX	2415862..2417148 (-)	1287	WP_151471405.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
WJM95_RS10645 (WJM95_10645)	clpP	2417309..2417989 (-)	681	WP_339129346.1	ATP-dependent Clp protease proteolytic subunit	Regulator
WJM95_RS10650 (WJM95_10650)	clpP	2418107..2418712 (-)	606	WP_037618823.1	ATP-dependent Clp protease proteolytic subunit	Regulator
WJM95_RS10655 (WJM95_10655)	tig	2419178..2420557 (-)	1380	WP_339129347.1	trigger factor	-
WJM95_RS10670 (WJM95_10670)	-	2421303..2421497 (-)	195	WP_037618829.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46967.83 Da
• Isoelectric Point: 4.8317

>NTDB_id=875301 WJM95_RS10640 WP_151471405.1 2415862..2417148(-) (clpX) [Streptomyces sp. f51]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLRNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=875301 WJM95_RS10640 WP_151471405.1 2415862..2417148(-) (clpX) [Streptomyces sp. f51]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGTCG
GCCAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCACGGGCCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTTCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGCGACGTCTCCGGCGAGGGCGTGCAGCAGGCGC
TGCTCAAGATCCTCGAGGGCACGACGGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGCGGGCCGGCGC
GAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGGGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTTCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCAGACCGGCGCGCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGCCGTGATGTACGAAGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTGCGCAACGTCAACCCGACCCTGATCCCCAGGGACGCCCGCCGCGGCGGCCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

3D structure

• AlphaFold DB: A0A7J5DDX9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521