Detailed information NTG0875296

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RCV51_RS11780
• Genome accession: NZ_CP133611
• Coordinates: 2521176..2522294 (-)
• Length: 372 a.a.
• NCBI ID: WP_013178135.1
• Uniprot ID: D7CYC8
• Organism: Truepera radiovictrix strain CIP 108686
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2516176..2527294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCV51_RS11755 (RCV51_11755)	-	2516835..2517071 (-)	237	WP_013178139.1	ferredoxin	-
RCV51_RS11760 (RCV51_11760)	-	2517166..2517849 (-)	684	WP_013178138.1	Crp/Fnr family transcriptional regulator	-
RCV51_RS11765 (RCV51_11765)	-	2517882..2518241 (+)	360	WP_041947201.1	pyridoxal-phosphate dependent enzyme	-
RCV51_RS11770 (RCV51_11770)	-	2518355..2519194 (+)	840	WP_013178137.1	cyclase family protein	-
RCV51_RS11775 (RCV51_11775)	malZ	2519272..2521170 (+)	1899	WP_013178136.1	maltodextrin glucosidase	-
RCV51_RS11780 (RCV51_11780)	dprA	2521176..2522294 (-)	1119	WP_013178135.1	DNA-processing protein DprA	Machinery gene
RCV51_RS11785 (RCV51_11785)	cysS	2522365..2523825 (-)	1461	WP_013178134.1	cysteine--tRNA ligase	-
RCV51_RS11790 (RCV51_11790)	-	2524067..2524657 (+)	591	WP_013178133.1	YigZ family protein	-
RCV51_RS11795 (RCV51_11795)	-	2524708..2524905 (-)	198	WP_013178132.1	hypothetical protein	-
RCV51_RS11800 (RCV51_11800)	-	2525158..2526732 (-)	1575	WP_041947200.1	hypothetical protein	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 38801.49 Da
• Isoelectric Point: 6.8974

>NTDB_id=875296 RCV51_RS11780 WP_013178135.1 2521176..2522294(-) (dprA) [Truepera radiovictrix strain CIP 108686]
MPPTPSPLLALAFTPGLGPRKLKALLEHFGDAASLADASAGALREVEGVGPKLAQTIVAFRAEGERRAAEERARAERLGV
QLLTLDDPDYPASLRGIYDPPPVLYVRGTLPAHLQGDLDAVRAVAVVGTRRASPFALELSREIARELARAGVVVVSGLAL
GVDTAAHEGALEAAPGATVAVLGSGVDRPYPAQNARLARRIADGGGAVVSEYRLGTPPRAEHFPGRNRIISGLARGVLVV
EGGVTSGALITAEFALEEGRTVFAVPGRARDPRAAGPLELLKQGAVLTERADDILSELGWRRAPSAPPKRDAPELTGLPQ
ELLTAIRQGGEPLLDDLVTATGRAAPELLSALMTLELKGLVRSLPSGRYAAL

Nucleotide

• Length: 1119 bp

>NTDB_id=875296 RCV51_RS11780 WP_013178135.1 2521176..2522294(-) (dprA) [Truepera radiovictrix strain CIP 108686]
GTGCCCCCGACGCCCTCCCCCCTGCTCGCCCTCGCGTTTACCCCGGGCCTGGGCCCGCGCAAGCTCAAGGCGCTCCTGGA
GCACTTCGGCGACGCCGCCTCGTTGGCTGACGCCTCCGCCGGGGCGCTCAGGGAGGTCGAGGGGGTCGGCCCGAAGCTCG
CCCAGACGATCGTGGCGTTTCGCGCCGAGGGGGAGCGCAGAGCCGCCGAGGAGCGCGCCCGCGCCGAGCGGCTGGGAGTG
CAGCTCCTCACGTTAGATGACCCCGACTACCCGGCGAGCCTGCGGGGGATTTACGACCCGCCACCCGTGCTCTACGTCCG
CGGGACCCTGCCCGCGCACCTGCAGGGCGACCTGGACGCGGTGCGCGCGGTGGCCGTGGTCGGCACGCGGCGCGCGAGCC
CCTTTGCCCTCGAGCTGAGCCGCGAGATCGCGCGCGAGCTGGCCCGAGCCGGCGTCGTGGTGGTCTCGGGGCTCGCGCTC
GGGGTCGACACCGCCGCGCACGAGGGCGCGCTCGAGGCTGCGCCCGGCGCGACGGTCGCCGTGCTGGGCTCCGGCGTCGA
CCGGCCCTACCCGGCCCAGAACGCGCGCTTGGCGCGGCGCATCGCCGACGGTGGCGGGGCGGTGGTGAGCGAGTACCGCC
TCGGCACGCCGCCCCGCGCCGAACACTTCCCGGGGCGCAACCGCATCATCAGCGGGCTCGCGCGCGGGGTGCTCGTCGTC
GAGGGGGGGGTCACGTCGGGTGCTCTCATCACCGCCGAGTTCGCGCTCGAGGAGGGCCGCACCGTCTTCGCCGTCCCCGG
CCGCGCCCGCGACCCGCGCGCCGCGGGGCCGCTCGAGCTCCTCAAGCAGGGCGCCGTGCTGACCGAGCGCGCCGACGACA
TCTTGAGCGAGCTCGGGTGGCGTCGGGCGCCGAGCGCGCCCCCGAAGCGCGACGCGCCGGAGCTCACCGGCCTCCCCCAG
GAGCTCCTCACCGCCATCCGCCAGGGGGGCGAACCGCTCCTCGACGACCTCGTCACGGCGACCGGCAGAGCCGCCCCCGA
GCTGCTGAGCGCGCTGATGACGCTCGAGCTTAAGGGCCTCGTCCGCAGCCTCCCGAGCGGGCGTTACGCGGCGCTGTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (306-366)

• DNA recombination-mediator protein A (DNA_processg_A) (75-287)

• Helix-hairpin-helix domain (HHH_5) (15-59)

3D structure

• AlphaFold DB: D7CYC8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	51.648	97.849	0.505
dprA	Thermus thermophilus HB27	45.179	97.581	0.441
dprA	Glaesserella parasuis strain SC1401	37.795	100	0.387
dprA	Legionella pneumophila strain ERS1305867	39.612	97.043	0.384
dprA	Vibrio campbellii strain DS40M4	38.587	98.925	0.382