Detailed information NTG0875090

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RE735_RS03130
• Genome accession: NZ_CP133585
• Coordinates: 614381..615556 (+)
• Length: 391 a.a.
• NCBI ID: WP_309174541.1
• Uniprot ID: -
• Organism: Bacillus aerius strain NEB1378
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 609381..620556

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RE735_RS03110 (RE735_03110)	-	609922..611169 (+)	1248	WP_309174537.1	glycosyltransferase	-
RE735_RS03115 (RE735_03115)	-	611304..612371 (+)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
RE735_RS03120 (RE735_03120)	-	612409..613506 (-)	1098	WP_309174539.1	LCP family protein	-
RE735_RS03125 (RE735_03125)	-	613491..614159 (-)	669	WP_309174540.1	YigZ family protein	-
RE735_RS03130 (RE735_03130)	degS	614381..615556 (+)	1176	WP_309174541.1	sensor histidine kinase	Regulator
RE735_RS03135 (RE735_03135)	degU	615620..616309 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
RE735_RS03140 (RE735_03140)	-	616522..617364 (+)	843	WP_309174542.1	DegV family protein	-
RE735_RS03145 (RE735_03145)	comFA	617484..618863 (+)	1380	WP_309174543.1	DEAD/DEAH box helicase	Machinery gene
RE735_RS03150 (RE735_03150)	-	618912..619178 (+)	267	WP_309174544.1	late competence development ComFB family protein	-
RE735_RS03155 (RE735_03155)	-	619139..619861 (+)	723	WP_309174545.1	ComF family protein	-
RE735_RS03160 (RE735_03160)	-	619918..620337 (+)	420	WP_309174546.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45495.20 Da
• Isoelectric Point: 5.8757

>NTDB_id=875090 RE735_RS03130 WP_309174541.1 614381..615556(+) (degS) [Bacillus aerius strain NEB1378]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIAK

Nucleotide

• Length: 1176 bp

>NTDB_id=875090 RE735_RS03130 WP_309174541.1 614381..615556(+) (degS) [Bacillus aerius strain NEB1378]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTGGTAGAAGAGCTTAAGCAAATCAAGCAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAACTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGCTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGTAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTAGGTCTCATTCCGACACTTCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCATTGGTGATACAGAAAGTGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTGAAAACAAATAAAAACAA
ATCCTTCGGGTTACTTGGCATGAAAGAACGCGTAGACTTACTAGAAGGTAAAATGACCATAGATTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTGCCGCTAACATTACAAAATAAAATTGCGAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.714	98.465	0.844