Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   RBH91_RS17710 Genome accession   NZ_CP133085
Coordinates   3552395..3554710 (-) Length   771 a.a.
NCBI ID   WP_307892378.1    Uniprot ID   -
Organism   Bacillus swezeyi strain EA208     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3547395..3559710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBH91_RS17670 - 3547869..3548300 (+) 432 WP_307892376.1 Na(+)/H(+) antiporter subunit B -
  RBH91_RS17675 - 3548300..3548641 (+) 342 WP_076762171.1 Na(+)/H(+) antiporter subunit C -
  RBH91_RS17680 - 3548634..3550112 (+) 1479 WP_076762172.1 Na+/H+ antiporter subunit D -
  RBH91_RS17685 - 3550118..3550594 (+) 477 WP_076762173.1 Na+/H+ antiporter subunit E -
  RBH91_RS17690 - 3550594..3550878 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  RBH91_RS17695 mnhG 3550862..3551236 (+) 375 WP_076762174.1 monovalent cation/H(+) antiporter subunit G -
  RBH91_RS17700 - 3551263..3551652 (-) 390 WP_307892377.1 hotdog fold thioesterase -
  RBH91_RS17705 comA 3551670..3552308 (-) 639 WP_076762176.1 response regulator transcription factor Regulator
  RBH91_RS17710 comP 3552395..3554710 (-) 2316 WP_307892378.1 ATP-binding protein Regulator
  RBH91_RS17715 comX 3554728..3554901 (-) 174 WP_307892379.1 competence pheromone ComX -
  RBH91_RS17720 - 3554885..3555784 (-) 900 WP_307892380.1 polyprenyl synthetase family protein -
  RBH91_RS17725 degQ 3555972..3556112 (-) 141 WP_076762028.1 degradation enzyme regulation protein DegQ Regulator
  RBH91_RS17730 - 3556598..3556945 (+) 348 WP_244948947.1 hypothetical protein -
  RBH91_RS17735 - 3556994..3558211 (-) 1218 WP_076762030.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 771 a.a.        Molecular weight: 88980.89 Da        Isoelectric Point: 7.9759

>NTDB_id=871760 RBH91_RS17710 WP_307892378.1 3552395..3554710(-) (comP) [Bacillus swezeyi strain EA208]
MKSFYNKLSAVLIFLSFIYVIYVCYISFNNTLIGLKVTNINDHSLRVVEVKKHSLAAEYAEIKKGDIIHKINGKPVPVKE
EEEYTLSNVLTLTIERSGKVFENDSLEYLDLVSSDSFFIFVIPLIFYFLSLICVFFIFKANKSKDLFSAFLLVLFLLVIS
IAYISAGAVARGDIFSRFVNILTFLSVPISYMHFIYHYFKELGKKLFSKKIFWLYLVPLFNVLLEIGLYYFDYGKGYIGS
INLLSFFSSATIVFALIIHSLIKHKYSQQSYLLKILMLTNFIALVPFLLFYVLPTLVLGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTLKVTVFTYLIMVGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGTVSLLEGETEEYPWIPYEKEVAKVITDIGK
IVEVDRGFLIKIGERGGTSYVMLCLSILNTPKLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPVWLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRLRLINMNEHMSNVIQMTRETCQELRPQLLY
DLGLVKALSKLAAQHRESSSIEKIRLNTEKFSKILDLDTQLNLYRIVQELLSNAAKHSKATEILIMLVCIKEKVVLHYED
NGIGVDQDKLYQNSANMGLSGIRERVRALNGSLEIQTAEGKGFRVVIEMEL

Nucleotide


Download         Length: 2316 bp        

>NTDB_id=871760 RBH91_RS17710 WP_307892378.1 3552395..3554710(-) (comP) [Bacillus swezeyi strain EA208]
ATGAAATCATTTTATAACAAGTTGTCAGCAGTTCTGATTTTTTTGAGTTTCATTTACGTTATCTATGTTTGTTATATTAG
CTTTAATAATACTTTAATTGGTTTAAAAGTAACAAATATCAATGATCACAGTCTAAGAGTTGTAGAAGTAAAAAAGCACT
CTTTAGCAGCGGAATACGCAGAAATAAAAAAGGGAGATATCATTCATAAGATTAATGGAAAACCGGTTCCGGTTAAAGAA
GAGGAAGAGTACACTCTGTCTAATGTTTTAACGTTAACAATTGAAAGATCGGGCAAAGTGTTTGAGAACGATTCTTTGGA
ATATTTAGACTTAGTCAGTTCTGATAGCTTTTTCATATTTGTCATTCCATTAATATTTTACTTCCTAAGTTTGATTTGTG
TATTTTTTATTTTTAAAGCAAATAAGTCGAAAGATCTCTTTTCAGCATTTTTATTAGTCCTGTTTCTTCTTGTTATTTCT
ATAGCCTATATTAGTGCAGGGGCGGTTGCAAGGGGAGATATTTTCAGCAGATTTGTTAACATACTTACATTTTTGTCTGT
TCCAATAAGCTATATGCATTTTATATATCACTATTTTAAAGAATTAGGAAAGAAATTATTTAGCAAAAAAATATTTTGGC
TTTATCTAGTGCCATTATTCAATGTCTTATTAGAAATAGGGCTGTATTATTTTGATTATGGAAAAGGTTATATTGGCAGT
ATTAATTTATTGTCGTTTTTCTCTTCAGCGACTATTGTTTTCGCTTTAATTATTCATTCTTTAATCAAACACAAATACTC
TCAACAATCTTACTTATTGAAAATATTAATGTTGACGAATTTTATTGCGCTAGTGCCGTTTTTATTATTTTATGTTCTTC
CAACACTTGTTTTAGGTGATTATATTTTTTCAGCAATTGTAGTGTCTCCATTTCTATTGCTGATTCCGCTTTCTCTGGTT
TATCAATTTATGTCCAATAAAATCTATGATATTGAGTTTCTTATTGGCCGGCTAAAATATTATAGTTTTTTAGCCATTAT
CCCGACTTCTCTAATTATCACCATTTTAGCTATAGTGAAACATCAAGAAGGAGAATTCTTTACACTTAAGGTTACTGTTT
TTACCTATCTTATTATGGTAGGAGTGTTTTATTTAAAAGAGATCATCGACTTCCGCTTTCGTCTGAAGCGATTTTCAGAG
AAATTTAACTATCAAGACAGCATCTTTAAATTTACTCAAACAATCCGAACATTTACGTCTTTGAATCAGGTTCTGATGGA
ATTAAAACAAATCGTTTTAGACGTACTACTTGTCAATAACATTTATATGTTGAAAGTGAAAAACGACGGAACGGTATCCT
TGCTTGAAGGAGAAACAGAAGAATATCCTTGGATACCATATGAAAAAGAAGTCGCCAAAGTCATTACCGACATCGGCAAA
ATCGTCGAAGTCGACCGCGGGTTTTTGATTAAAATCGGTGAACGAGGCGGGACGTCGTATGTCATGCTGTGTCTGTCGAT
TTTAAACACGCCTAAGCTGACGCGCGATGAGATTTCCTGGCTTGAGACGCTGGCCTTTTATACGAGCGTTTCCTTGGAAA
ACGTTTTGAAAATCGGCGAGCTGATGGAGCATCTTGAAAATGTCAAAAAAGAGGGGCCGAATCCGGTTTGGCTGAATAAG
CTGATGTTTGCGATTGAAGAGAAGCAGAGGTCTGACTTGGCAAGGGATTTGCATGATTCAGTGCTGCAGGACATGATTTC
ATTGAAGCATCAAAGCGAGATGTTTCTTGCCGATTTTGAAAAAGATAAAGTCTGCACGAATCAAATTCGGCTTAGGCTCA
TCAATATGAATGAGCACATGTCAAACGTCATTCAAATGACAAGAGAAACATGCCAGGAGCTGAGACCGCAGCTATTGTAT
GATCTCGGCCTCGTAAAGGCGCTTTCCAAACTGGCGGCGCAGCATCGAGAATCCTCCTCGATTGAAAAGATCCGCCTCAA
TACCGAAAAGTTTTCAAAGATATTGGATCTTGATACACAGCTGAATCTGTACAGGATCGTGCAGGAGCTTCTGAGCAATG
CGGCAAAGCATTCAAAAGCCACTGAGATTTTGATTATGCTTGTCTGCATTAAAGAAAAAGTCGTGCTTCATTATGAGGAT
AACGGTATCGGAGTTGACCAGGACAAGCTTTATCAAAACAGCGCAAACATGGGGCTGTCAGGGATTCGCGAGCGCGTCCG
CGCTTTGAATGGCAGTCTGGAGATTCAGACAGCAGAAGGGAAAGGCTTCAGAGTCGTCATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(570-639)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(682-769)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.368

100

0.534