Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   RBH91_RS17705 Genome accession   NZ_CP133085
Coordinates   3551670..3552308 (-) Length   212 a.a.
NCBI ID   WP_076762176.1    Uniprot ID   A0A1R1RSH1
Organism   Bacillus swezeyi strain EA208     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3546670..3557308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBH91_RS17670 - 3547869..3548300 (+) 432 WP_307892376.1 Na(+)/H(+) antiporter subunit B -
  RBH91_RS17675 - 3548300..3548641 (+) 342 WP_076762171.1 Na(+)/H(+) antiporter subunit C -
  RBH91_RS17680 - 3548634..3550112 (+) 1479 WP_076762172.1 Na+/H+ antiporter subunit D -
  RBH91_RS17685 - 3550118..3550594 (+) 477 WP_076762173.1 Na+/H+ antiporter subunit E -
  RBH91_RS17690 - 3550594..3550878 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  RBH91_RS17695 mnhG 3550862..3551236 (+) 375 WP_076762174.1 monovalent cation/H(+) antiporter subunit G -
  RBH91_RS17700 - 3551263..3551652 (-) 390 WP_307892377.1 hotdog fold thioesterase -
  RBH91_RS17705 comA 3551670..3552308 (-) 639 WP_076762176.1 response regulator transcription factor Regulator
  RBH91_RS17710 comP 3552395..3554710 (-) 2316 WP_307892378.1 ATP-binding protein Regulator
  RBH91_RS17715 comX 3554728..3554901 (-) 174 WP_307892379.1 competence pheromone ComX -
  RBH91_RS17720 - 3554885..3555784 (-) 900 WP_307892380.1 polyprenyl synthetase family protein -
  RBH91_RS17725 degQ 3555972..3556112 (-) 141 WP_076762028.1 degradation enzyme regulation protein DegQ Regulator
  RBH91_RS17730 - 3556598..3556945 (+) 348 WP_244948947.1 hypothetical protein -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 24135.51 Da        Isoelectric Point: 4.5801

>NTDB_id=871759 RBH91_RS17705 WP_076762176.1 3551670..3552308(-) (comA) [Bacillus swezeyi strain EA208]
MRRLLVIDDHPAVMEGTKAILETNQDFIVDCLSPEASEQFLTKHDFSAYDLILMDLNLGEINGMDLSKKILETCSSCKII
VYTGYEVEDYFEEAIRSGMHGAISKTESKEKIIEYIYQVLDNKIVVDYDYFKQLITQQKTKSSSQQTEHELLTERECLIL
KEVEKGYTNQEIADALHLSKRSIEYSLTSVFSKLNVGSRTEAVLIAKSEGVL

Nucleotide


Download         Length: 639 bp        

>NTDB_id=871759 RBH91_RS17705 WP_076762176.1 3551670..3552308(-) (comA) [Bacillus swezeyi strain EA208]
ATGAGAAGATTACTTGTGATCGATGATCATCCGGCTGTCATGGAGGGAACGAAGGCAATTCTTGAAACGAATCAGGATTT
TATTGTCGATTGCCTCAGCCCGGAAGCAAGCGAACAATTTCTGACGAAGCATGATTTTTCTGCGTATGATCTGATCTTAA
TGGATTTGAACCTTGGTGAAATCAACGGAATGGACCTATCTAAGAAAATCCTTGAGACATGTTCATCATGCAAAATTATC
GTATACACAGGATATGAAGTAGAAGACTATTTTGAAGAAGCGATACGTTCAGGCATGCACGGCGCGATCAGCAAAACAGA
ATCCAAGGAAAAGATTATCGAGTACATATATCAAGTTTTGGATAATAAAATTGTCGTAGATTATGATTATTTTAAACAGC
TGATCACACAGCAGAAAACAAAATCAAGCAGCCAGCAGACCGAACATGAGCTCTTGACCGAAAGGGAATGTCTGATCTTA
AAAGAAGTCGAAAAAGGCTATACGAATCAGGAGATTGCCGATGCTCTGCATTTAAGCAAGCGCTCGATTGAATACAGTTT
GACGTCCGTCTTCAGCAAACTGAATGTCGGCTCAAGGACAGAAGCTGTTTTAATCGCAAAATCTGAAGGTGTACTTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(151-206)

Response regulator receiver domain (Response_reg)

(5-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1R1RSH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

77.103

100

0.778