Detailed information NTG0871547

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RBI12_RS10450
• Genome accession: NZ_CP133054
• Coordinates: 2185534..2186289 (-)
• Length: 251 a.a.
• NCBI ID: WP_017482271.1
• Uniprot ID: A0A9X3QRW6
• Organism: Acinetobacter pittii strain A774
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2180534..2191289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBI12_RS10420 (RBI12_10455)	-	2180842..2181282 (-)	441	WP_017482269.1	SRPBCC family protein	-
RBI12_RS10425 (RBI12_10460)	tadA	2181353..2181856 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
RBI12_RS10430 (RBI12_10465)	hibch	2181862..2182986 (-)	1125	WP_378216246.1	enoyl-CoA hydratase/isomerase family protein	-
RBI12_RS10435 (RBI12_10470)	ung	2182983..2183696 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
RBI12_RS10440 (RBI12_10475)	-	2183750..2184346 (-)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
RBI12_RS10445 (RBI12_10480)	gspK	2184574..2185533 (-)	960	WP_017482270.1	type II secretion system minor pseudopilin GspK	-
RBI12_RS10450 (RBI12_10485)	xcpW	2185534..2186289 (-)	756	WP_017482271.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RBI12_RS10455 (RBI12_10490)	xcpV	2186289..2186669 (-)	381	WP_017482272.1	type II secretion system minor pseudopilin GspI	Machinery gene
RBI12_RS10460 (RBI12_10495)	-	2186659..2187213 (-)	555	WP_017482273.1	type II secretion system protein	-
RBI12_RS10465 (RBI12_10500)	-	2187220..2187828 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
RBI12_RS10470 (RBI12_10505)	ycfH	2187865..2188638 (-)	774	WP_017482274.1	TatD family hydrolase	-
RBI12_RS10475 (RBI12_10510)	pilZ	2188656..2188997 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
RBI12_RS10480 (RBI12_10515)	holB	2189008..2189988 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
RBI12_RS10485 (RBI12_10520)	kdsB	2190002..2190763 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28666.92 Da
• Isoelectric Point: 9.7425

>NTDB_id=871547 RBI12_RS10450 WP_017482271.1 2185534..2186289(-) (xcpW) [Acinetobacter pittii strain A774]
MIKNKSFHSPGPASRLAARSEQMMRGYSEQSSSSCAQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLLLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=871547 RBI12_RS10450 WP_017482271.1 2185534..2186289(-) (xcpW) [Acinetobacter pittii strain A774]
ATGATAAAGAATAAAAGTTTTCACTCTCCAGGCCCAGCTTCCCGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCAG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATTGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80	99.602	0.797