Detailed information NTG0087149

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BsBEST3145_RS18875
• Genome accession: NZ_AP024625
• Coordinates: 3607202..3607924 (-)
• Length: 240 a.a.
• NCBI ID: WP_003227991.1
• Uniprot ID: A0AAE2SKX0
• Organism: Bacillus subtilis strain BEST3109
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3602202..3612924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BsBEST3145_RS18840 (BsBEST3109_36270)	fliW	3602341..3602772 (-)	432	WP_003228007.1	flagellar assembly protein FliW	-
BsBEST3145_RS18845 (BsBEST3109_36280)	yviE	3602793..3603368 (-)	576	WP_003243053.1	DUF6470 family protein	-
BsBEST3145_RS18850 (BsBEST3109_36290)	flgL	3603415..3604311 (-)	897	WP_003228004.1	flagellar hook-associated protein FlgL	-
BsBEST3145_RS18855 (BsBEST3109_36300)	flgK	3604322..3605845 (-)	1524	WP_003228001.1	flagellar hook-associated protein FlgK	-
BsBEST3145_RS18860 (BsBEST3109_36310)	flgN	3605864..3606346 (-)	483	WP_003227999.1	flagellar protein FlgN	-
BsBEST3145_RS18865 (BsBEST3109_36320)	flgM	3606362..3606628 (-)	267	WP_003227997.1	flagellar biosynthesis anti-sigma factor FlgM	-
BsBEST3145_RS18870 (BsBEST3109_36330)	yvyF	3606709..3607128 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
BsBEST3145_RS18875 (BsBEST3109_36340)	comFC	3607202..3607924 (-)	723	WP_003227991.1	comF operon protein ComFC	Machinery gene
BsBEST3145_RS18880 (BsBEST3109_36350)	comFB	3607888..3608184 (-)	297	WP_003227989.1	late competence protein ComFB	-
BsBEST3145_RS18885 (BsBEST3109_36360)	comFA	3608244..3609635 (-)	1392	WP_003243962.1	ATP-dependent helicase ComFA	Machinery gene
BsBEST3145_RS18890 (BsBEST3109_36370)	fakBA	3609741..3610586 (-)	846	WP_003244125.1	DegV family protein	-
BsBEST3145_RS18895 (BsBEST3109_36380)	degU	3610684..3611373 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BsBEST3145_RS18900 (BsBEST3109_36390)	degS	3611456..3612613 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27477.75 Da
• Isoelectric Point: 9.0021

>NTDB_id=87149 BsBEST3145_RS18875 WP_003227991.1 3607202..3607924(-) (comFC) [Bacillus subtilis strain BEST3109]
MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRD
SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAHLLAECL
DRPSHHPLIRLNNEKQSKKKKTERLLSECIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Nucleotide

• Length: 723 bp

>NTDB_id=87149 BsBEST3145_RS18875 WP_003227991.1 3607202..3607924(-) (comFC) [Bacillus subtilis strain BEST3109]
ATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATG
GAGAGCCCTTTTTTTACTAAAGCCTGATGAAAAGGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCCCCCTGTGCGGCAGACCTCAATCTGTTCATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGATCAGAGAC
AGTTTGCTATTGCGTCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCATTTAAAAGTGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTG
TTCTTGTACCTATTCCGCTGAGCAAGGAACGGGAAGAAGAGCGCGGATTTAACCAGGCACATCTCTTGGCAGAATGTTTA
GACCGGCCTTCCCACCATCCCCTCATTCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTC
AGAGTGCATTTTTGATACAAAAAATAATTCAGCAGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CCACCTTGCACTTCGCAGCCCGCTGCTTATTAGAAAAAGGAAAAGCCGCTTCAGTGTCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	100	100	1