Detailed information NTG0870744

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: RBB55_RS13570
• Genome accession: NZ_CP132915
• Coordinates: 2815522..2817954 (-)
• Length: 810 a.a.
• NCBI ID: WP_377802805.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A207
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2802349..2818725	2815522..2817954	within	0

Gene organization within MGE regions

Location: 2802349..2818725

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBB55_RS13505 (RBB55_13530)	-	2802349..2802669 (+)	321	WP_001015075.1	hypothetical protein	-
RBB55_RS13510 (RBB55_13535)	-	2802659..2803048 (+)	390	WP_000225917.1	DUF3106 domain-containing protein	-
RBB55_RS13515 (RBB55_13540)	-	2803139..2805568 (-)	2430	WP_002125338.1	CSLREA domain-containing protein	-
RBB55_RS13520 (RBB55_13545)	rbtA	2805584..2806585 (-)	1002	Protein_2646	rhombotarget A	-
RBB55_RS13525 (RBB55_13550)	-	2806639..2807571 (+)	933	WP_004739641.1	IS5-like element ISAba13 family transposase	-
RBB55_RS13530 (RBB55_13555)	rbtA	2807625..2808480 (-)	856	Protein_2648	rhombotarget A	-
RBB55_RS13535 (RBB55_13560)	hda	2808797..2809495 (-)	699	WP_001249536.1	DnaA regulatory inactivator Hda	-
RBB55_RS13540 (RBB55_13565)	cxpE	2809516..2810709 (-)	1194	WP_004834083.1	chloramphenicol efflux transporter CxpE	-
RBB55_RS13545 (RBB55_13570)	purM	2810845..2811915 (+)	1071	WP_000071984.1	phosphoribosylformylglycinamidine cyclo-ligase	-
RBB55_RS13550 (RBB55_13575)	purN	2811912..2812541 (+)	630	WP_377802804.1	phosphoribosylglycinamide formyltransferase	-
RBB55_RS13555 (RBB55_13580)	-	2812605..2813414 (-)	810	WP_002122676.1	alpha/beta fold hydrolase	-
RBB55_RS13560 (RBB55_13585)	sppA	2813433..2814449 (-)	1017	WP_001286615.1	signal peptide peptidase SppA	-
RBB55_RS13565 (RBB55_13590)	-	2814586..2815569 (+)	984	WP_001984639.1	lysophospholipid acyltransferase family protein	-
RBB55_RS13570 (RBB55_13595)	comA/comEC	2815522..2817954 (-)	2433	WP_377802805.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RBB55_RS13575 (RBB55_13600)	lolD	2818039..2818725 (-)	687	WP_000049406.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92483.70 Da
• Isoelectric Point: 8.5889

>NTDB_id=870744 RBB55_RS13570 WP_377802805.1 2815522..2817954(-) (comA/comEC) [Acinetobacter baumannii strain A207]
MFKIILLGWIGGIALMGIDFPLIMQYEKVGEALLLLAFIFYLYKRPMFVDRPFLKAVFCLLCTTSLFMVGYHYAEKALIE
RLEQRETDTRNLDIIVYINRLSEEKDNKVQQTAQVLNLSKEPVNWLLYLKSNNQNLLKNNQNLELGHYYRISGKTRPAHS
YATPGAFDQEKWFIQRNIMSGFNVRYIEPLSLDEIYRLGYQQHLKEQQSFSNSFRLNIEKLRLTFRQILNSSSLQQKGLI
LALLTGDESLLSDETQLQFKQLGISHLLAISGPHVLIFAIMLSWACHQFISRYYPQIYLWKPKQVLMAVPCCLGVLIYTA
FVGFEIPALRTLLSTLIFIGFLLLKQPIKPFTLLVYSASLLLLIDPFSVLSAGFWLSYGACFILLRIYQTIAQLPEQHFL
SLSSKMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIIAACAWFVVKPFGNMLFHFND
MLLSILLSYLGLIEKLSLPLQGISLTPLSLLAISFAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNILDVGQGQ
AIFLQHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVRQLDHVVLSHLDQDHSGAFPLIQQEIPVKQLISNEQLPND
LKQPFQYCHQGQQWHYPELDIQILWPKEKDLAFVASNQNQYSCVVYLQFKKVGGYQNFLIMGDAGWEAEYELLKDYPNLK
IDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQEVIARLKALHIPLKSTVEQGTLNFVLENHKIVLHDRR
LDRLWLSRGF

Nucleotide

• Length: 2433 bp

>NTDB_id=870744 RBB55_RS13570 WP_377802805.1 2815522..2817954(-) (comA/comEC) [Acinetobacter baumannii strain A207]
ATGTTTAAGATTATTCTATTGGGGTGGATTGGCGGTATTGCATTGATGGGAATAGATTTCCCTTTAATCATGCAATATGA
AAAAGTGGGCGAGGCTCTACTGTTACTTGCCTTTATTTTTTATCTTTATAAACGACCAATGTTCGTTGATCGACCATTTT
TAAAGGCAGTGTTTTGCTTATTATGTACAACAAGTCTTTTTATGGTTGGCTACCACTATGCTGAAAAAGCACTGATTGAA
CGATTAGAACAAAGAGAAACAGATACCCGAAATCTCGACATTATTGTCTATATAAACCGTTTAAGTGAAGAAAAAGATAA
TAAGGTTCAACAAACTGCACAAGTTTTAAATCTTTCTAAAGAACCGGTGAATTGGTTGCTATATTTAAAAAGTAATAATC
AAAATTTATTAAAGAATAATCAGAATCTTGAATTAGGTCACTATTATCGAATATCTGGAAAAACAAGGCCTGCGCATAGT
TATGCCACCCCAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATTATGTCTGGTTTTAACGTGAGATATAT
TGAGCCTTTAAGTCTCGATGAAATCTATCGATTGGGCTATCAGCAACATTTAAAAGAACAACAGTCTTTTTCCAATAGTT
TTCGTTTAAATATAGAAAAACTTCGCTTAACTTTTAGGCAAATATTAAACAGCTCATCTTTACAGCAAAAGGGTTTAATT
TTAGCTTTGCTGACAGGTGATGAAAGCCTTTTATCAGATGAAACTCAACTACAGTTCAAACAATTAGGAATTAGTCATTT
ATTGGCGATCTCAGGCCCACATGTGCTCATTTTTGCCATTATGTTATCTTGGGCATGTCATCAATTTATCAGTCGTTATT
ATCCTCAAATTTACTTATGGAAACCGAAACAGGTTTTGATGGCTGTACCATGCTGCCTTGGTGTTTTAATTTATACTGCA
TTTGTAGGTTTCGAAATTCCTGCACTACGAACATTATTATCAACCCTTATATTTATTGGATTTCTATTATTAAAACAACC
TATTAAACCTTTTACATTACTCGTATATAGCGCAAGTCTACTGTTGTTAATTGACCCGTTTAGTGTGCTTTCTGCAGGTT
TTTGGCTGTCTTATGGGGCATGTTTTATTTTATTAAGAATTTACCAAACTATAGCGCAGCTACCTGAGCAACATTTTTTA
AGTCTGAGCTCAAAAATGATTTTTATGAGTAAGGTGTTAATTGAATCTCAAGGCAAAATATTTATTGCATTGAGTCCCTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGGTTGCTCCATTAACCAATATTATTGCTGTACCTATTGTTGGTGGTGTTA
TTGTCCCTTTAAACATCATAGCTGCTTGCGCATGGTTTGTAGTAAAACCATTTGGAAATATGCTTTTTCATTTCAATGAT
ATGTTGCTCAGCATATTGCTGAGTTATTTGGGCTTAATAGAAAAACTCTCTTTACCATTACAAGGTATAAGCTTGACGCC
ACTGTCTTTATTAGCGATTAGTTTTGCCATAATTATTTTATTTTTACCTAAAGGAATTCTGCCCAAAACTTGGGGGATAT
TATGTTGTTTACCCTTAGTTATTATGAACAAAACGAGTCAGCAAATTCAGCTTAATATTTTAGATGTTGGACAGGGGCAA
GCCATTTTTTTACAACATTCCGAACAAAACTGGTTAATTGATACAGGCGGTTCTTACGATGAAAAAATATTTAGTATTGG
ACAAAATGTTGTAGTGCCTTTTCTACGTCAGCAAGGCGTAAGACAATTAGATCATGTTGTGCTATCCCATCTTGATCAAG
ACCATAGTGGCGCGTTTCCTCTTATTCAACAAGAGATTCCTGTAAAGCAGCTTATTTCGAATGAACAATTACCAAATGAT
TTAAAGCAACCATTCCAATATTGCCATCAAGGGCAACAATGGCATTATCCTGAGTTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATCTGGCTTTTGTTGCTTCTAACCAGAATCAATATTCTTGTGTTGTATATCTTCAATTTAAAAAAGTTGGTG
GTTACCAAAATTTTCTTATTATGGGCGATGCTGGATGGGAAGCTGAATACGAGTTATTAAAAGATTATCCTAACTTGAAG
ATAGATGTGTTAGTGCTAGGGCATCATGGAAGTAAGCACAGTTCGGCTTATGATTTCTTGGCGACCTTAAAACCTAAACT
GGCCATTGCATCGGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAAGAAGTTATAGCACGTTTAAAAGCTCTACATA
TTCCGCTAAAAAGTACTGTGGAACAAGGGACCTTAAATTTTGTATTGGAAAATCACAAAATAGTTTTACATGACCGACGT
TTGGATAGGCTCTGGTTGAGTAGAGGTTTTTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-639)

• Competence protein (Competence) (243-521)

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	98.025	100	0.98
comA/comEC	Acinetobacter baumannii strain A118	97.407	100	0.974
comA/comEC	Acinetobacter baylyi ADP1	50.062	100	0.501