Detailed information NTG0870677

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RA292_RS17585
• Genome accession: NZ_CP132912
• Coordinates: 3414511..3415668 (-)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus subtilis subsp. natto strain BN-P15-11-1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3409511..3420668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA292_RS17555	yvyF	3409764..3410183 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
RA292_RS17560	comFC	3410257..3410979 (-)	723	WP_003227991.1	comF operon protein ComFC	Machinery gene
RA292_RS17565	comFB	3410943..3411239 (-)	297	WP_003227989.1	late competence protein ComFB	-
RA292_RS17570	comFA	3411299..3412690 (-)	1392	WP_003243962.1	ATP-dependent helicase ComFA	Machinery gene
RA292_RS17575	fakBA	3412796..3413641 (-)	846	WP_003244125.1	DegV family protein	-
RA292_RS17580	degU	3413739..3414428 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RA292_RS17585	degS	3414511..3415668 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
RA292_RS17590	yvyE	3415885..3416538 (+)	654	WP_003227979.1	YigZ family protein	-
RA292_RS17595	tagV	3416538..3417713 (+)	1176	WP_003244117.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
RA292_RS17600	tagO	3417786..3418862 (-)	1077	WP_003227975.1	MraY family glycosyltransferase	-
RA292_RS17605	tuaH	3419007..3420200 (-)	1194	WP_003243252.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=870677 RA292_RS17585 WP_003227983.1 3414511..3415668(-) (degS) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=870677 RA292_RS17585 WP_003227983.1 3414511..3415668(-) (degS) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1