Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RA292_RS01695 Genome accession   NZ_CP132912
Coordinates   356132..357082 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. natto strain BN-P15-11-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 351132..362082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RA292_RS01670 rapC 352591..353739 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  RA292_RS01675 phrC 353723..353845 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  RA292_RS01680 yczM 353945..354034 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  RA292_RS01685 yczN 354116..354229 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  RA292_RS01690 thrD 354383..355747 (-) 1365 WP_003234493.1 aspartate kinase -
  RA292_RS01695 ceuB 356132..357082 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  RA292_RS01700 yclO 357075..358022 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  RA292_RS01705 yclP 358016..358774 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  RA292_RS01710 yclQ 358796..359749 (+) 954 WP_003234484.1 petrobactin ABC transporter substrate-binding protein YclQ -
  RA292_RS01715 cdaE 359796..361214 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=870614 RA292_RS01695 WP_003234491.1 356132..357082(+) (ceuB) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=870614 RA292_RS01695 WP_003234491.1 356132..357082(+) (ceuB) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522