Detailed information NTG0870612

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: RA292_RS01670
• Genome accession: NZ_CP132912
• Coordinates: 352591..353739 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis subsp. natto strain BN-P15-11-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 347591..358739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA292_RS01650	yclH	347968..348648 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
RA292_RS01655	yclI	348664..350124 (-)	1461	WP_003234506.1	ABC transporter permease	-
RA292_RS01660	yclJ	350337..351020 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
RA292_RS01665	yclK	351007..352428 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
RA292_RS01670	rapC	352591..353739 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
RA292_RS01675	phrC	353723..353845 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
RA292_RS01680	yczM	353945..354034 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
RA292_RS01685	yczN	354116..354229 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
RA292_RS01690	thrD	354383..355747 (-)	1365	WP_003234493.1	aspartate kinase	-
RA292_RS01695	ceuB	356132..357082 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
RA292_RS01700	yclO	357075..358022 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=870612 RA292_RS01670 WP_003246686.1 352591..353739(+) (rapC) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=870612 RA292_RS01670 WP_003246686.1 352591..353739(+) (rapC) [Bacillus subtilis subsp. natto strain BN-P15-11-1]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571