Detailed information NTG0870598

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: RA164_RS13195
• Genome accession: NZ_CP132911
• Coordinates: 2927494..2928927 (+)
• Length: 477 a.a.
• NCBI ID: WP_329741302.1
• Uniprot ID: -
• Organism: Dyella aluminiiresistens strain A6
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2922494..2933927

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA164_RS13185	-	2924609..2926279 (+)	1671	WP_329741300.1	trehalase family glycosidase	-
RA164_RS13190	-	2926340..2927410 (+)	1071	WP_329741301.1	alpha/beta hydrolase	-
RA164_RS13195	pilR	2927494..2928927 (+)	1434	WP_329741302.1	sigma-54 dependent transcriptional regulator	Regulator
RA164_RS13200	-	2928974..2930572 (-)	1599	WP_329741303.1	tetratricopeptide repeat-containing sulfotransferase family protein	-
RA164_RS13205	ssb	2930712..2931227 (-)	516	WP_329741304.1	single-stranded DNA-binding protein	Machinery gene
RA164_RS13210	-	2931347..2932543 (-)	1197	WP_329741305.1	MFS transporter	-
RA164_RS13215	-	2932707..2933711 (+)	1005	WP_329741306.1	polyprenyl synthetase family protein	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 51379.77 Da
• Isoelectric Point: 5.9382

>NTDB_id=870598 RA164_RS13195 WP_329741302.1 2927494..2928927(+) (pilR) [Dyella aluminiiresistens strain A6]
MSQQTVLVIDDERDIRELLTITLGRMDLKVDAVGTVTDARRALAENTYDLCFTDMRLPDGNGQEVIELIAEDHPDMPVAM
ITAYGNVDAAVNALKAGAFDFVSKPVDIQMLRRLVRTALKLAEERRSGNGADSGASGGGSRLIGDSPVMQQVRATIGKLA
RNQAPVYIAGESGVGKELVARLIHEQGPRASGPFVPVNCGAIPSELMESEFFGHKKGSFTGAAADKEGLFQAANGGTLFL
DEVAELPLHMQVKLLRAIQEKAVRPIGAREEIPVDVRILSATHKNLAALVEHGQFRQDLFYRINVIELRVPPLRERRGDV
PLLSAFILKQLAAKNGGDEGRLLPDAKQALESYDFPGNVRELENILERAMAMCESDGITADDLMLPQRAPRPAEATPSHP
APQAGMPPAAHAAGAPAAAATPPAGPDGGLDDYISNLERNAIVKALEESRYNKTAAARKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1434 bp

>NTDB_id=870598 RA164_RS13195 WP_329741302.1 2927494..2928927(+) (pilR) [Dyella aluminiiresistens strain A6]
ATGAGCCAACAGACCGTCCTGGTCATTGACGACGAACGCGATATTCGCGAGCTGCTTACCATTACCCTCGGCCGCATGGA
CCTCAAGGTCGATGCGGTCGGGACGGTCACCGACGCCAGGCGGGCGCTCGCCGAAAACACCTACGACCTGTGCTTCACCG
ACATGCGCCTGCCCGACGGCAACGGGCAGGAGGTGATCGAGCTGATCGCCGAAGATCATCCGGACATGCCGGTGGCCATG
ATCACCGCCTACGGCAACGTCGATGCCGCGGTGAATGCACTGAAGGCCGGCGCCTTCGACTTCGTGTCCAAGCCGGTCGA
CATCCAGATGCTGCGACGGCTGGTGCGCACGGCGCTCAAGCTGGCCGAGGAGCGCCGTTCCGGCAACGGTGCGGACAGCG
GCGCATCGGGCGGCGGCAGCCGGCTGATCGGCGACTCGCCGGTCATGCAGCAGGTCCGCGCCACCATCGGCAAGCTGGCG
CGCAACCAGGCGCCGGTCTACATCGCAGGCGAATCGGGCGTGGGCAAGGAACTGGTGGCCCGGCTGATCCATGAGCAGGG
ACCACGTGCCAGCGGACCGTTCGTACCGGTGAACTGCGGCGCGATACCGTCCGAACTGATGGAAAGCGAGTTCTTCGGTC
ACAAGAAGGGCAGCTTCACCGGTGCAGCGGCCGACAAGGAAGGCCTGTTCCAGGCGGCCAACGGCGGCACCCTGTTTCTG
GACGAGGTGGCCGAACTGCCCCTGCACATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGGCCGTGCGCCCGATCGG
CGCGCGCGAGGAAATCCCGGTCGACGTGCGCATCCTGTCGGCCACGCACAAGAACCTCGCCGCGCTGGTCGAACATGGCC
AGTTCCGGCAGGACCTGTTCTACCGCATCAACGTGATCGAACTGCGCGTGCCGCCGCTGCGCGAGCGGCGCGGCGACGTG
CCGCTGCTGTCCGCCTTCATCCTGAAGCAGCTTGCCGCCAAGAACGGCGGTGACGAAGGTCGCCTGCTGCCGGACGCGAA
ACAGGCGCTGGAGTCGTACGATTTTCCCGGCAACGTGCGCGAGCTGGAAAACATTCTCGAGCGTGCCATGGCCATGTGCG
AGAGCGACGGCATCACCGCCGACGACCTGATGCTGCCGCAACGTGCGCCACGCCCTGCCGAGGCGACGCCCAGCCACCCG
GCGCCCCAAGCCGGCATGCCCCCCGCCGCACATGCTGCGGGTGCGCCGGCGGCAGCCGCAACCCCGCCTGCGGGTCCCGA
TGGCGGCCTCGACGACTACATCAGCAACCTCGAGCGCAATGCGATCGTCAAGGCACTCGAGGAGTCGCGCTACAACAAGA
CCGCGGCCGCACGGAAGCTCGGCATCACCTTCCGCGCATTGCGCTACAAGCTGAAGAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (435-474)

• Sigma-54 interaction domain (Sigma54_activat) (142-308)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.958	100	0.6
pilR	Acinetobacter baumannii strain A118	47.158	99.581	0.47