Detailed information NTG0869614

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RA177_RS16380
• Genome accession: NZ_CP132599
• Coordinates: 3207547..3208722 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain PL23A
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3202547..3213722

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA177_RS16350 (RA177_16365)	-	3202715..3203134 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
RA177_RS16355 (RA177_16370)	comFC	3203192..3203848 (-)	657	WP_231506847.1	ComF family protein	Machinery gene
RA177_RS16360 (RA177_16375)	-	3203875..3204168 (-)	294	WP_024426256.1	late competence development ComFB family protein	-
RA177_RS16365 (RA177_16380)	comFA	3204217..3205614 (-)	1398	WP_306655275.1	DEAD/DEAH box helicase	Machinery gene
RA177_RS16370 (RA177_16385)	-	3205735..3206577 (-)	843	WP_024423625.1	DegV family protein	-
RA177_RS16375 (RA177_16390)	degU	3206793..3207482 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
RA177_RS16380 (RA177_16395)	degS	3207547..3208722 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
RA177_RS16385 (RA177_16400)	-	3208943..3209611 (+)	669	WP_012011434.1	YigZ family protein	-
RA177_RS16390 (RA177_16405)	-	3209596..3210687 (+)	1092	WP_024423626.1	LCP family protein	-
RA177_RS16395 (RA177_16410)	-	3210723..3211790 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
RA177_RS16400 (RA177_16415)	-	3211925..3213121 (-)	1197	WP_041108506.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=869614 RA177_RS16380 WP_003213166.1 3207547..3208722(-) (degS) [Bacillus safensis strain PL23A]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=869614 RA177_RS16380 WP_003213166.1 3207547..3208722(-) (degS) [Bacillus safensis strain PL23A]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGTCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGGAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTTCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTTATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841