Detailed information NTG0867656

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: O5O45_RS30525
• Genome accession: NZ_CP132203
• Coordinates: 6861654..6863012 (-)
• Length: 452 a.a.
• NCBI ID: WP_305903025.1
• Uniprot ID: -
• Organism: Hahella sp. HNIBRBA332
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 6856654..6868012

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O5O45_RS30510 (O5O45_30510)	-	6857001..6860405 (+)	3405	WP_305903022.1	PilC/PilY family type IV pilus protein	-
O5O45_RS30515 (O5O45_30515)	-	6860418..6860912 (+)	495	WP_305903023.1	type IV pilin protein	-
O5O45_RS30520 (O5O45_30520)	-	6860974..6861522 (-)	549	WP_305903024.1	GspH/FimT family pseudopilin	-
O5O45_RS30525 (O5O45_30525)	pilR	6861654..6863012 (-)	1359	WP_305903025.1	sigma-54 dependent transcriptional regulator	Regulator
O5O45_RS30530 (O5O45_30530)	-	6863024..6864613 (-)	1590	WP_305903026.1	PAS domain-containing sensor histidine kinase	-
O5O45_RS30535 (O5O45_30535)	-	6864783..6866411 (+)	1629	WP_305903027.1	NAD+ synthase	-
O5O45_RS30540 (O5O45_30540)	-	6866520..6867374 (-)	855	WP_305903028.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 50278.59 Da
• Isoelectric Point: 5.1213

>NTDB_id=867656 O5O45_RS30525 WP_305903025.1 6861654..6863012(-) (pilR) [Hahella sp. HNIBRBA332]
MIKKVLIVDDEPDIRALLEITLSRMQIETRAAENITQAKQLLSEESFSLVLTDMNMPDGNGIDLVAHIQKQSSNTPVAVI
TAYGSIDTAISALKAGAFDFVSKPVDLARLRELVNSALKLSKNDAPKASPQVTQLLGESSTMDKLRGQIRKLARSQAPIY
ISGESGSGKEMVAKSIHEQGPRCEGPFVPVNCGAIPGELMESEFFGHKKGAFTGAVENKVGLFQAANGGTLFLDEVADLP
LTMQVKLLRAIQEKAVRPVGEQKEIPIDVRILSATHKDLHNEVDEGRFRQDLFYRINVIELRVPSLRQRKEDIPLLANHF
LKQLADECEIPNASISKAAMQKLESYYFPGNVRELENIMERAFTLCEDDVINEEDIHLPKTDTEGSAADAMELDVPEFDE
NKVNLEHFLENIEKQAIEKALEETRWNKTAAAKKLGISFRALRYRLKKLGME

Nucleotide

• Length: 1359 bp

>NTDB_id=867656 O5O45_RS30525 WP_305903025.1 6861654..6863012(-) (pilR) [Hahella sp. HNIBRBA332]
ATGATAAAGAAAGTACTCATCGTTGACGACGAACCCGATATTCGCGCGTTACTGGAAATCACTTTAAGCCGCATGCAGAT
AGAAACACGGGCGGCTGAAAATATTACACAAGCCAAGCAGTTGCTAAGTGAAGAAAGCTTCAGCCTTGTACTGACTGATA
TGAACATGCCGGACGGCAATGGTATCGACCTTGTCGCCCACATCCAGAAGCAGTCCTCTAATACACCAGTAGCAGTCATT
ACAGCTTACGGTAGCATTGATACGGCCATTTCCGCACTTAAGGCTGGCGCCTTTGATTTTGTCTCTAAACCTGTAGATCT
TGCCCGTCTGCGCGAGCTGGTTAACAGTGCACTGAAGCTGTCGAAAAATGACGCGCCCAAAGCATCCCCTCAAGTAACCC
AATTGCTCGGCGAGTCATCCACCATGGACAAACTACGCGGGCAAATTAGAAAACTCGCGCGCAGTCAGGCGCCGATTTAT
ATCAGCGGCGAGTCAGGCAGCGGTAAGGAAATGGTCGCCAAGTCGATTCATGAACAAGGGCCGCGATGCGAAGGACCTTT
CGTGCCAGTCAACTGTGGCGCTATTCCCGGCGAGCTAATGGAAAGTGAATTTTTCGGCCACAAAAAAGGGGCATTTACCG
GCGCAGTTGAAAATAAAGTGGGACTATTTCAGGCGGCAAACGGCGGAACCTTGTTTCTCGACGAAGTCGCTGATTTACCC
CTAACGATGCAGGTGAAACTTCTGCGCGCGATTCAGGAAAAAGCGGTTCGTCCAGTCGGCGAACAAAAAGAGATCCCCAT
CGACGTTCGCATACTGTCCGCCACCCATAAAGATTTGCACAATGAAGTAGATGAGGGACGGTTTCGTCAAGACCTTTTCT
ACCGAATTAATGTCATTGAACTGAGAGTCCCAAGCTTACGCCAACGAAAAGAAGACATTCCGCTTCTTGCTAATCATTTT
CTTAAACAACTGGCGGACGAGTGTGAGATCCCCAACGCTTCAATTAGCAAAGCCGCCATGCAGAAACTGGAATCTTATTA
TTTCCCTGGCAACGTTCGTGAACTCGAAAATATTATGGAGCGCGCCTTTACCCTATGCGAAGACGACGTCATAAACGAAG
AGGACATCCACCTGCCTAAGACAGATACAGAAGGCTCAGCAGCAGACGCAATGGAACTAGATGTTCCTGAGTTCGACGAG
AACAAGGTCAACCTTGAACACTTTCTTGAGAACATTGAAAAGCAAGCTATTGAGAAAGCACTTGAAGAAACTCGGTGGAA
TAAAACAGCGGCAGCCAAAAAGCTGGGAATCAGTTTTCGCGCCCTGCGCTATCGCCTGAAGAAACTAGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-114)

• Bacterial regulatory protein, Fis family (HTH_8) (408-449)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	66.004	100	0.662
pilR	Acinetobacter baumannii strain A118	51.522	100	0.524
luxO	Vibrio cholerae strain A1552	37.668	98.673	0.372