Detailed information NTG0867634

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: O5O45_RS02695
• Genome accession: NZ_CP132203
• Coordinates: 546823..548037 (-)
• Length: 404 a.a.
• NCBI ID: WP_305903757.1
• Uniprot ID: -
• Organism: Hahella sp. HNIBRBA332
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 541823..553037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O5O45_RS02670 (O5O45_02670)	-	542139..542801 (-)	663	WP_305903752.1	SDR family oxidoreductase	-
O5O45_RS02675 (O5O45_02675)	-	542885..543454 (-)	570	WP_305903753.1	NADPH-dependent FMN reductase	-
O5O45_RS02680 (O5O45_02680)	-	543802..544398 (+)	597	WP_305903754.1	DUF938 domain-containing protein	-
O5O45_RS02685 (O5O45_02685)	-	544438..545091 (-)	654	WP_305903755.1	DUF4291 domain-containing protein	-
O5O45_RS02690 (O5O45_02690)	-	545213..546589 (-)	1377	WP_305903756.1	wax ester/triacylglycerol synthase family O-acyltransferase	-
O5O45_RS02695 (O5O45_02695)	pilU	546823..548037 (-)	1215	WP_305903757.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
O5O45_RS02700 (O5O45_02700)	-	548326..550872 (+)	2547	WP_305903758.1	EAL domain-containing protein	-
O5O45_RS02705 (O5O45_02705)	-	550922..551746 (-)	825	WP_305903759.1	OmpA family protein	-
O5O45_RS02710 (O5O45_02710)	-	551868..552686 (-)	819	WP_305903760.1	alpha/beta fold hydrolase	-

Sequence

Protein

• Length: 404 a.a.
• Molecular weight: 44910.16 Da
• Isoelectric Point: 5.4889

>NTDB_id=867634 O5O45_RS02695 WP_305903757.1 546823..548037(-) (pilU) [Hahella sp. HNIBRBA332]
MEFNQYLTVLAKNDGSDLYLSTGAPPCAKFHGKLKPIDKTPIPPGRIMEIANSIMDEEQREQFAHELEMNLAYSIPQVGR
FRVNIFKQRNEVSIVARNIVTDIPNADSLGLPPILKEVLMSKRGLILFVGATGSGKSTSLAALIDHRNSNSGGHIITIED
PVEFIHKHKKSIINQREVGVDTRSYHNALKNTLRQAPDVILIGEIRDRETMEHALAFAETGHLCISTLHANNSNQALDRI
INFFPEERRNQLLMDLSLNLRAFVSQRLVPTIDGKRTAAIEILLGTPTVSELILRGDIDGIKEIMQKSENIGMQTFDAAL
FKLVQQEKISVEEALKNADSANNLRLRIKLHAGVEVPTSLGDEKVEDAGPEELSAKKPSSGFSLSLQEIEEDDEEDNDPF
KPKN

Nucleotide

• Length: 1215 bp

>NTDB_id=867634 O5O45_RS02695 WP_305903757.1 546823..548037(-) (pilU) [Hahella sp. HNIBRBA332]
ATGGAATTCAACCAGTATCTGACCGTTCTGGCCAAGAATGACGGATCCGACCTCTACCTGAGCACCGGCGCGCCGCCCTG
CGCCAAGTTTCACGGTAAATTGAAGCCCATCGATAAAACCCCCATTCCGCCGGGCAGAATCATGGAAATCGCCAACTCCA
TCATGGATGAAGAGCAGCGCGAACAATTCGCCCATGAACTGGAAATGAACCTGGCGTACAGCATCCCTCAGGTTGGCCGT
TTCCGGGTCAACATCTTCAAACAGCGTAATGAAGTATCCATCGTCGCCCGAAATATCGTGACGGATATTCCCAACGCTGA
CAGCCTGGGACTGCCCCCTATCCTGAAAGAAGTATTGATGTCGAAACGGGGGCTGATTCTGTTCGTCGGCGCCACCGGCT
CGGGCAAATCCACCTCTCTGGCGGCGCTGATCGACCACCGCAACAGCAATAGCGGCGGTCATATCATAACCATCGAAGAC
CCGGTGGAGTTCATCCACAAGCACAAGAAAAGCATCATCAACCAGCGGGAAGTGGGCGTAGACACGCGCAGTTATCACAA
TGCGTTGAAAAACACCCTGCGGCAGGCGCCGGATGTGATTCTGATCGGCGAGATCCGCGACCGGGAAACCATGGAGCACG
CGCTGGCTTTCGCGGAAACCGGACATCTGTGTATATCCACCCTGCACGCCAATAACTCCAACCAGGCGCTGGACCGCATC
ATCAACTTTTTCCCGGAAGAGCGACGCAATCAGCTACTGATGGACTTATCGCTTAACTTAAGAGCTTTCGTCTCTCAACG
TCTGGTGCCGACTATCGATGGCAAGCGCACTGCCGCCATCGAGATTCTGCTGGGCACGCCCACGGTCAGTGAATTGATCC
TGCGCGGCGATATCGACGGCATCAAAGAGATCATGCAGAAGTCGGAAAACATAGGCATGCAGACCTTTGACGCGGCGCTG
TTCAAGCTGGTGCAGCAAGAAAAGATCAGCGTGGAGGAAGCCCTGAAAAACGCCGACTCCGCCAACAACCTGCGTCTGCG
CATCAAGCTGCACGCCGGCGTGGAGGTTCCCACTAGTCTGGGCGATGAAAAGGTCGAGGACGCAGGCCCCGAAGAATTGT
CCGCCAAGAAGCCCAGCAGCGGCTTTTCTCTCAGCCTGCAGGAAATTGAAGAGGACGACGAGGAGGACAACGACCCCTTC
AAACCTAAAAATTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (114-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.835	86.881	0.502
pilU	Acinetobacter baylyi ADP1	56.534	87.129	0.493
pilU	Vibrio cholerae strain A1552	49.435	87.624	0.433