Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   Q8W18_RS15070 Genome accession   NZ_CP132058
Coordinates   2900108..2902399 (-) Length   763 a.a.
NCBI ID   WP_306011132.1    Uniprot ID   -
Organism   Bacillus pumilus strain F12-21     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2895108..2907399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q8W18_RS15030 (Q8W18_15030) - 2895519..2895950 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  Q8W18_RS15035 (Q8W18_15035) - 2895950..2896291 (+) 342 WP_169055619.1 Na(+)/H(+) antiporter subunit C -
  Q8W18_RS15040 (Q8W18_15040) - 2896284..2897762 (+) 1479 WP_306011131.1 Na+/H+ antiporter subunit D -
  Q8W18_RS15045 (Q8W18_15045) - 2897769..2898248 (+) 480 WP_169055621.1 Na+/H+ antiporter subunit E -
  Q8W18_RS15050 (Q8W18_15050) - 2898248..2898529 (+) 282 WP_012011105.1 Na(+)/H(+) antiporter subunit F1 -
  Q8W18_RS15055 (Q8W18_15055) mnhG 2898513..2898887 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  Q8W18_RS15060 (Q8W18_15060) - 2898973..2899362 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  Q8W18_RS15065 (Q8W18_15065) comA 2899386..2900027 (-) 642 WP_169055622.1 response regulator transcription factor Regulator
  Q8W18_RS15070 (Q8W18_15070) comP 2900108..2902399 (-) 2292 WP_306011132.1 ATP-binding protein Regulator
  Q8W18_RS15075 (Q8W18_15075) comX 2902413..2902586 (-) 174 WP_306011133.1 competence pheromone ComX -
  Q8W18_RS15080 (Q8W18_15080) - 2902564..2903487 (-) 924 WP_323639225.1 polyprenyl synthetase family protein -
  Q8W18_RS15085 (Q8W18_15085) degQ 2903639..2903779 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  Q8W18_RS15090 (Q8W18_15090) - 2904285..2904638 (+) 354 WP_034620108.1 hypothetical protein -
  Q8W18_RS15095 (Q8W18_15095) - 2904670..2905896 (-) 1227 WP_012011110.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 763 a.a.        Molecular weight: 88343.65 Da        Isoelectric Point: 7.3879

>NTDB_id=867065 Q8W18_RS15070 WP_306011132.1 2900108..2902399(-) (comP) [Bacillus pumilus strain F12-21]
MQKFYSKLTVILMILSFFYVIYISYINVFNIFVGAVVSVNDNDQLEILDVVDFTDSYYAGVRKGDIILEVNGSKEPTEEV
RRGYLANVKSLVVDRHGDEIVIKNVRLLSQENLFIYLIPVIFYSICLFCIFMILKINKSRKKESAYILALFLLAVAVAYV
SSGGSGKGEYISGFIVITTMTCVPPLYMHFMYQYLKELGTKIISVRVLLSLYAVPFINLVLEIYFKNMVLAAFNLLSFFT
LAFITIIITFRSAKRWKGTEIGNVLSAFGLVLITSFSPFMLFFIIPYFFHKYFISPYILASFALLIPFFLVYQFMSNKLY
NVDFFMGRIKYYSLLAITPTIVVVIIFDFIQKPSANFYTLKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNYQDSVF
KFTQLIRDASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIEEIDEQTEDSNLWKKYVDQFHDLLGEVGKIIELNKGF
MIKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMFAMEEK
QRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDLGLVKAIS
KLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYEDDGVGFDAS
HLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=867065 Q8W18_RS15070 WP_306011132.1 2900108..2902399(-) (comP) [Bacillus pumilus strain F12-21]
ATGCAGAAATTTTACTCAAAACTAACTGTTATTTTAATGATCCTTAGCTTCTTTTATGTGATTTATATTTCCTACATCAA
TGTGTTTAATATTTTTGTAGGAGCAGTCGTTTCGGTAAATGACAACGATCAACTTGAAATATTAGATGTTGTAGATTTTA
CAGACAGCTATTATGCTGGTGTTAGAAAAGGCGATATTATACTTGAAGTGAATGGAAGCAAAGAACCTACGGAAGAAGTA
AGAAGAGGCTATTTAGCAAATGTTAAAAGTTTAGTTGTGGATAGACATGGCGATGAAATTGTCATAAAAAATGTCAGGTT
ATTAAGTCAAGAAAATCTGTTTATTTATTTGATACCTGTCATTTTTTATTCAATCTGCCTATTTTGTATATTTATGATTT
TAAAAATCAACAAATCTAGGAAAAAAGAGTCTGCATATATCCTTGCCCTTTTTTTATTGGCTGTTGCTGTAGCATATGTC
AGTTCTGGTGGATCTGGTAAAGGTGAGTATATTAGTGGTTTTATCGTCATTACTACGATGACTTGTGTACCTCCTTTATA
TATGCACTTTATGTATCAGTATTTGAAGGAATTGGGTACGAAAATTATTAGCGTACGTGTGCTTCTTTCTTTGTATGCAG
TTCCATTTATAAATCTTGTTTTAGAAATTTATTTCAAAAATATGGTTTTAGCTGCTTTCAACTTACTTTCGTTTTTTACA
CTTGCATTTATAACGATTATTATCACATTCAGATCAGCTAAAAGGTGGAAAGGCACGGAAATTGGTAATGTCCTTAGTGC
ATTTGGACTTGTCTTAATCACGTCATTCAGTCCTTTTATGCTGTTCTTTATCATTCCATATTTTTTTCATAAGTATTTTA
TTTCGCCTTATATTCTTGCTTCGTTTGCATTATTAATTCCGTTTTTCTTAGTCTATCAATTTATGTCAAATAAATTATAT
AATGTTGATTTCTTTATGGGAAGAATTAAATATTACAGCCTTTTAGCTATCACACCTACGATAGTAGTGGTGATTATATT
TGATTTCATTCAGAAGCCAAGTGCTAATTTTTATACATTGAAATTTACAATTATCACATACATTCTTATGCTCACCGTTT
TTTATTTTAAAGAAATCATCGATTTTCGTTTTCGTCTAAAGCGTTTCTCAGAGAAACATAATTATCAGGATAGTGTGTTT
AAATTTACTCAGCTCATTCGTGATGCTTCATCACTTCATCAAGTGTTATATCATTTGAAATACACCATTTTAGAAGTACT
TGTTGTGAATAAAGCCTTTGTGCTCGAGGTGAAGGCTGATGGACAAATTGAAGAAATTGATGAGCAGACAGAAGACAGCA
ACCTATGGAAAAAGTATGTCGATCAATTTCACGATTTATTAGGCGAAGTAGGGAAAATCATCGAGCTTAATAAAGGGTTT
ATGATAAAAATTGGTGAGCGGGGCGGTCACTCTTTTGTGATTTGCTGTTTATCTAATTTACGTACACCTAAATTGACGCG
GGATGAGATTTCTTGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTCAAGATTGAAGAATTGA
TGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAATCCCGCTTGGCTGAAAAAAGTCATGTTTGCGATGGAGGAAAAA
CAGCGCTCCGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATCGCTGAAAAGACAGTCAGAGATGTT
TTTAACGAATTTCCAAAACGATCAATGCCCAACGTCTATTGAACAATCGCTTATCTCATGGAATGAACAAATGTCTAAGG
TGATTCAAACGACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTAGGTTTAGTGAAGGCGATATCG
AAGCTGACTTCTCAAATTCAGGAGGAAGCACCGTTTCATATTCGGCTGAATACGACACGCTTTGATAAGGAGCTGGACAT
TGACATTGACTCCCAGCTCAATATTTACCGAATTGTTCAGGAGCTGTTATCCAATGCCTTGAAACATTCTCAAGCCAGCC
AAGTGCTTGTAATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGATGGAGTTGGTTTTGACGCAAGC
CATCTTGATCAGCACACCATGAGCATGGGCCTTTCTGGCATCAGAGAACGAGTCAAGGCGTTAAATGGGAAGCTTCACAT
TCACACAGCACCTGAAAAAGGGCTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.1

100

0.501