Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q7572_RS16055 Genome accession   NZ_CP131878
Coordinates   3275816..3276226 (-) Length   136 a.a.
NCBI ID   WP_004883163.1    Uniprot ID   A0A836MNT4
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3270816..3281226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS16025 (Q7572_16060) - 3270902..3271171 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  Q7572_RS16030 (Q7572_16065) rapZ 3271168..3272019 (-) 852 WP_002054547.1 RNase adapter RapZ -
  Q7572_RS16035 (Q7572_16070) panC 3272042..3272890 (-) 849 WP_002054580.1 pantoate--beta-alanine ligase -
  Q7572_RS16040 (Q7572_16075) panB 3272894..3273703 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  Q7572_RS16045 (Q7572_16080) folK 3273749..3274231 (-) 483 WP_004883158.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  Q7572_RS16050 (Q7572_16085) pcnB 3274228..3275691 (-) 1464 WP_004883161.1 polynucleotide adenylyltransferase PcnB -
  Q7572_RS16055 (Q7572_16090) comEA 3275816..3276226 (-) 411 WP_004883163.1 ComEA family DNA-binding protein Machinery gene
  Q7572_RS16060 (Q7572_16095) mazG 3276195..3277001 (-) 807 WP_000359488.1 nucleoside triphosphate pyrophosphohydrolase -
  Q7572_RS16065 (Q7572_16100) - 3277113..3277886 (+) 774 WP_000682841.1 SDR family oxidoreductase -
  Q7572_RS16070 (Q7572_16105) - 3277930..3280236 (-) 2307 WP_002125975.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15672.97 Da        Isoelectric Point: 10.4475

>NTDB_id=865727 Q7572_RS16055 WP_004883163.1 3275816..3276226(-) (comEA) [Acinetobacter nosocomialis strain 2014S01-097]
MQYSMRFWKNKYFLLIMLCLGVISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNDFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=865727 Q7572_RS16055 WP_004883163.1 3275816..3276226(-) (comEA) [Acinetobacter nosocomialis strain 2014S01-097]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTCTTTTAATAATGTTGTGCTTGGGGGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGATTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTGGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCCATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A836MNT4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963
  comEA Acinetobacter baumannii D1279779

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

41.985

96.324

0.404