Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   Q7572_RS04775 Genome accession   NZ_CP131878
Coordinates   1009487..1011919 (+) Length   810 a.a.
NCBI ID   WP_004885725.1    Uniprot ID   A0AA36K9T9
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1004487..1016919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS04745 (Q7572_04760) - 1004638..1005579 (-) 942 WP_004707450.1 hypothetical protein -
  Q7572_RS04750 (Q7572_04765) - 1005836..1006321 (+) 486 WP_079377047.1 YaiI/YqxD family protein -
  Q7572_RS04755 (Q7572_04770) - 1006332..1007239 (+) 908 Protein_910 EamA family transporter -
  Q7572_RS04760 (Q7572_04775) - 1007269..1007370 (-) 102 Protein_911 PilZ domain-containing protein -
  Q7572_RS04765 (Q7572_04780) - 1007487..1008722 (+) 1236 WP_004707458.1 lipoprotein-releasing ABC transporter permease subunit -
  Q7572_RS04770 (Q7572_04785) lolD 1008715..1009401 (+) 687 WP_004885722.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  Q7572_RS04775 (Q7572_04790) comA/comEC 1009487..1011919 (+) 2433 WP_004885725.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q7572_RS04780 (Q7572_04795) - 1011872..1012855 (-) 984 WP_004707465.1 lysophospholipid acyltransferase family protein -
  Q7572_RS04785 (Q7572_04800) sppA 1012988..1014004 (+) 1017 WP_009500454.1 signal peptide peptidase SppA -
  Q7572_RS04790 (Q7572_04805) - 1014024..1014833 (+) 810 WP_004885735.1 alpha/beta hydrolase -
  Q7572_RS04795 (Q7572_04810) purN 1014898..1015527 (-) 630 WP_002052470.1 phosphoribosylglycinamide formyltransferase -
  Q7572_RS04800 (Q7572_04815) purM 1015524..1016594 (-) 1071 WP_000071984.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 810 a.a.        Molecular weight: 92714.84 Da        Isoelectric Point: 8.3181

>NTDB_id=865716 Q7572_RS04775 WP_004885725.1 1009487..1011919(+) (comA/comEC) [Acinetobacter nosocomialis strain 2014S01-097]
MFKIILLGWVGGIALMGIDFPLIMQYEKVGEALLLLAFIFYLYKRSVFVSRPFLKAMYSLLCAASLFVVGYQYAENALVE
RLQQREMDSKNLDIIVYINQLSEEKDNKVQQNAQVLNLSKDPVNWLLYLKNDNQSMLKSNQELQLGHYYRLSGKTKPAHS
YATAGAFDQEKWFIQRNIMSGFIVQYIEPLSLDEIYRLGYQQHSREQQSFFNRFQINIEKLRLNFRHLLQNSSLQQKGLI
LALLTGDESLLSDETQIQFKQLGIAHLLAISGPHVLIFAIMLSWSCHQVICRYYPQIYLWKLKQVLMAIPCCFGVLIYTA
FVGFEIPALRTLLSVFIFISFIVLKQPLKPFALLVYSASLLLLMDPFSVLSAGFWLSYGACFILLRIYQTIVQIPDQHFL
SLRSKMNFMTKVLIESQGKIFIALSPLTLLFFQQISWIAPLTNIVAVPIVGGIIVPLNILAACTWFIVKPFGNMLFYFND
ILLSILLSCLGLLEKLSLPLQGISLTPLYLLAISFAIIILFLPKGILPKTWGILCCLPLVIVNNTSQQIQLNILDVGQGQ
AIFLQHFEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVKRLDRVVLSHLDQDHSGAFPFIQQEIPVKQVLSNEQSSTT
LKQPFQYCHQGQQWQYPELDIQILWPKEKDLAFVHSQQNQYSCVVYLHFKGISDYQNFLIMGDAGWEAEYELLEDYPSLK
VDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNPYGHPSQEVINRLKALHIPLKSTVEQGTLSFVLENQKIVLHNRR
FERLWLRRVP

Nucleotide


Download         Length: 2433 bp        

>NTDB_id=865716 Q7572_RS04775 WP_004885725.1 1009487..1011919(+) (comA/comEC) [Acinetobacter nosocomialis strain 2014S01-097]
ATGTTTAAGATTATTCTATTGGGGTGGGTTGGCGGTATTGCATTGATGGGAATAGATTTCCCTTTAATCATGCAATATGA
AAAAGTGGGCGAGGCTCTACTGTTACTTGCCTTTATTTTTTATCTTTATAAACGCTCAGTATTCGTTAGCCGACCATTTT
TAAAGGCAATGTATTCTTTGTTATGTGCAGCCAGCCTTTTTGTTGTGGGGTATCAATATGCCGAGAATGCGTTGGTCGAA
CGCTTACAACAAAGAGAAATGGATTCAAAAAATCTCGATATTATTGTTTATATAAATCAACTAAGTGAAGAAAAAGACAA
TAAAGTTCAACAAAATGCTCAAGTATTAAACCTATCTAAAGATCCGGTAAATTGGCTACTGTATTTAAAAAATGATAATC
AAAGTATGTTGAAGAGCAATCAAGAACTTCAATTAGGCCATTACTATCGACTATCTGGAAAAACAAAACCTGCTCATAGT
TACGCCACAGCAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATAATGTCTGGTTTTATTGTTCAGTATAT
TGAGCCTTTAAGCCTTGATGAAATTTATCGATTGGGATATCAACAGCATTCAAGAGAACAGCAGTCCTTTTTTAATAGAT
TTCAAATAAATATAGAAAAGCTGCGCTTAAATTTTAGGCATCTATTGCAAAATTCTTCACTACAACAAAAAGGGCTAATT
TTAGCTTTGCTGACTGGTGATGAAAGCCTTTTATCAGATGAGACCCAAATACAATTTAAACAATTGGGAATTGCTCACTT
GTTAGCGATTTCAGGGCCACATGTACTTATTTTTGCCATCATGTTGTCTTGGTCCTGTCATCAAGTCATCTGCCGTTATT
ATCCTCAAATTTACTTATGGAAACTCAAACAAGTTTTGATGGCTATACCATGCTGTTTCGGTGTTTTAATTTATACAGCT
TTTGTGGGGTTCGAAATTCCTGCACTACGGACATTGTTGTCAGTCTTTATATTTATTTCTTTTATAGTATTAAAACAACC
TCTTAAACCATTTGCATTGCTCGTATACAGCGCAAGTTTATTATTACTCATGGACCCGTTTAGTGTCTTGTCTGCAGGTT
TTTGGTTGTCTTATGGGGCATGCTTTATTTTATTAAGAATTTATCAAACTATAGTTCAAATACCTGATCAACATTTTTTA
AGCTTACGCTCGAAAATGAATTTTATGACTAAGGTGTTAATTGAGTCTCAAGGCAAAATCTTTATTGCATTGAGTCCTTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGATTGCTCCATTAACCAATATTGTTGCGGTGCCTATCGTTGGTGGGATTA
TTGTTCCTTTAAATATTCTGGCTGCTTGTACATGGTTTATTGTCAAACCATTTGGAAACATGCTTTTTTATTTCAATGAT
ATCTTGCTCAGCATATTGCTAAGTTGTTTGGGCTTATTAGAAAAACTCTCTTTACCATTACAAGGTATAAGCTTGACACC
ACTGTATTTATTAGCGATTAGTTTTGCCATAATTATTTTATTTTTACCTAAAGGAATTCTGCCCAAAACTTGGGGAATAT
TATGTTGTTTACCTTTAGTTATTGTGAACAACACGAGTCAGCAAATTCAGCTTAATATTTTAGATGTTGGGCAGGGGCAG
GCCATTTTTTTACAACATTTCGAACAAAACTGGTTAATTGACACAGGCGGTTCTTACGATGAAAAAATATTTAGTATTGG
ACAAAATGTTGTAGTTCCATTCTTACGCCAACAAGGAGTAAAGCGATTAGATCGTGTTGTGCTATCTCATCTTGATCAAG
ATCATAGTGGGGCTTTTCCTTTCATTCAGCAGGAGATTCCTGTAAAGCAGGTTCTCTCAAATGAGCAATCTTCCACTACT
CTAAAGCAGCCATTTCAGTATTGTCATCAAGGTCAACAATGGCAATATCCTGAATTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATTTAGCTTTTGTCCATTCTCAACAGAATCAATATTCCTGTGTGGTATATCTGCATTTTAAAGGAATTAGTG
ATTACCAAAATTTTCTGATTATGGGAGACGCTGGATGGGAGGCAGAATACGAATTGTTAGAAGACTATCCAAGTTTAAAA
GTAGATGTTTTGGTATTAGGCCATCATGGAAGCAAGCACAGTTCGGCTTATGATTTTTTAGCAACCCTAAAACCAAAACT
GGCAATTGCATCGGCAGGGTTTGATAACCCTTATGGCCATCCAAGCCAAGAGGTTATCAATCGTTTAAAAGCCCTTCATA
TCCCGCTTAAAAGTACAGTAGAGCAAGGAACGTTAAGTTTTGTTTTGGAAAACCAAAAAATAGTTTTACACAACCGACGT
TTTGAGCGCCTCTGGTTGCGTAGAGTTCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

86.262

99.753

0.86

  comA/comEC Acinetobacter baumannii strain A118

85.272

99.753

0.851

  comA/comEC Acinetobacter baylyi ADP1

50.554

100

0.507