Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q7574_RS15210 Genome accession   NZ_CP131867
Coordinates   3184406..3184810 (-) Length   134 a.a.
NCBI ID   WP_005066267.1    Uniprot ID   -
Organism   Acinetobacter pittii strain 2012N08-034     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3179406..3189810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7574_RS15180 (Q7574_15240) - 3179490..3179759 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  Q7574_RS15185 (Q7574_15245) rapZ 3179756..3180607 (-) 852 WP_342063329.1 RNase adapter RapZ -
  Q7574_RS15190 (Q7574_15250) panC 3180631..3181479 (-) 849 WP_002117191.1 pantoate--beta-alanine ligase -
  Q7574_RS15195 (Q7574_15255) panB 3181483..3182292 (-) 810 WP_002117298.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  Q7574_RS15200 (Q7574_15260) folK 3182338..3182820 (-) 483 WP_032057517.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  Q7574_RS15205 (Q7574_15265) pcnB 3182817..3184280 (-) 1464 WP_005066269.1 polynucleotide adenylyltransferase PcnB -
  Q7574_RS15210 (Q7574_15270) comEA 3184406..3184810 (-) 405 WP_005066267.1 ComEA family DNA-binding protein Machinery gene
  Q7574_RS15215 (Q7574_15275) mazG 3184779..3185585 (-) 807 WP_005066265.1 nucleoside triphosphate pyrophosphohydrolase -
  Q7574_RS15220 (Q7574_15280) - 3185698..3186471 (+) 774 WP_342063330.1 SDR family oxidoreductase -
  Q7574_RS15225 (Q7574_15285) - 3186993..3188306 (+) 1314 WP_342063987.1 hypothetical protein -
  Q7574_RS15230 (Q7574_15290) - 3188326..3188736 (+) 411 WP_063098121.1 DUF1425 domain-containing protein -
  Q7574_RS15235 (Q7574_15295) lpoB 3188790..3189392 (+) 603 WP_063098120.1 penicillin-binding protein activator LpoB -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 15454.70 Da        Isoelectric Point: 10.5869

>NTDB_id=865637 Q7574_RS15210 WP_005066267.1 3184406..3184810(-) (comEA) [Acinetobacter pittii strain 2012N08-034]
MQLSMNLWKNKHNIFIILFWSLISSTLVQAQSFDQNFKEWKAKQQRYDQKLSMQHSSHSNSPKSSVMTDSSGQIHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKTRLTL

Nucleotide


Download         Length: 405 bp        

>NTDB_id=865637 Q7574_RS15210 WP_005066267.1 3184406..3184810(-) (comEA) [Acinetobacter pittii strain 2012N08-034]
ATGCAGCTCAGCATGAATCTTTGGAAGAATAAGCACAATATTTTCATTATTTTATTTTGGAGCCTGATCTCATCAACGCT
AGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAGGCTAAACAGCAGAGGTATGATCAGAAGTTGAGCATGC
AGCACTCCTCTCATTCTAACAGTCCAAAAAGTTCAGTTATGACTGATTCGTCAGGGCAAATTCACTTGAATCAAGCCAAT
ATTGATGAGCTCCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAGGCAATTGTGGAATACCGTCAAAAGAATGGCGG
CTTTAAAAATATTGATGAATTTAAAAACGTAAAGGGCATTGGTCCAGCCATTTTTGAAAAGAATAAAACGCGTTTGACTT
TATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(71-133)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

69.343

100

0.709
  comEA Acinetobacter baumannii D1279779

69.343

100

0.709
  comEA Acinetobacter baylyi ADP1

43.548

92.537

0.403