Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   Q7574_RS01610 Genome accession   NZ_CP131867
Coordinates   336700..337227 (+) Length   175 a.a.
NCBI ID   WP_017481730.1    Uniprot ID   A0A010ITU2
Organism   Acinetobacter pittii strain 2012N08-034     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 331700..342227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7574_RS01595 (Q7574_01595) pilM 334213..335271 (+) 1059 WP_005067078.1 pilus assembly protein PilM Machinery gene
  Q7574_RS01600 (Q7574_01600) pilN 335271..335912 (+) 642 WP_342063563.1 PilN domain-containing protein Machinery gene
  Q7574_RS01605 (Q7574_01605) pilO 335909..336688 (+) 780 WP_342063564.1 type 4a pilus biogenesis protein PilO Machinery gene
  Q7574_RS01610 (Q7574_01610) pilP 336700..337227 (+) 528 WP_017481730.1 pilus assembly protein PilP Machinery gene
  Q7574_RS01615 (Q7574_01615) pilQ 337290..339404 (+) 2115 WP_342063565.1 type IV pilus secretin PilQ family protein Machinery gene
  Q7574_RS01620 (Q7574_01620) aroK 339416..339985 (+) 570 WP_060464991.1 shikimate kinase AroK -
  Q7574_RS01625 (Q7574_01625) aroB 340014..341096 (+) 1083 WP_151282584.1 3-dehydroquinate synthase -
  Q7574_RS01630 (Q7574_01630) - 341113..341982 (+) 870 WP_342063566.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19253.42 Da        Isoelectric Point: 9.7299

>NTDB_id=865616 Q7574_RS01610 WP_017481730.1 336700..337227(+) (pilP) [Acinetobacter pittii strain 2012N08-034]
MKLKKILLSLGIGLVLVGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=865616 Q7574_RS01610 WP_017481730.1 336700..337227(+) (pilP) [Acinetobacter pittii strain 2012N08-034]
ATGAAACTAAAGAAAATTTTACTTTCTCTGGGGATAGGCCTGGTTTTGGTTGGATGCGACTCTAGAATCGACGCCGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCGGCACCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTGAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTGCAGGTAGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGACTTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTGGTGTTAATTGGACCTGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A010ITU2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

88

100

0.88
  comL Acinetobacter baylyi ADP1

73.964

96.571

0.714