Detailed information NTG0864727

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: Q7613_RS03825
• Genome accession: NZ_CP131720
• Coordinates: 750631..751323 (+)
• Length: 230 a.a.
• NCBI ID: WP_038440789.1
• Uniprot ID: A0AAJ8WR53
• Organism: Haemophilus influenzae strain 2016N07-308
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 745631..756323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7613_RS03805 (Q7613_03805)	ampD	746902..747462 (-)	561	WP_070828280.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
Q7613_RS03810 (Q7613_03810)	pilA	747577..748026 (+)	450	WP_011271973.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
Q7613_RS03815 (Q7613_03815)	pilB	748023..749417 (+)	1395	WP_011271972.1	GspE/PulE family protein	Machinery gene
Q7613_RS03820 (Q7613_03820)	pilC	749414..750634 (+)	1221	WP_011271971.1	type II secretion system F family protein	Machinery gene
Q7613_RS03825 (Q7613_03825)	pilD	750631..751323 (+)	693	WP_038440789.1	A24 family peptidase	Machinery gene
Q7613_RS03830 (Q7613_03830)	rho	751377..752639 (-)	1263	WP_005629550.1	transcription termination factor Rho	-
Q7613_RS03835 (Q7613_03835)	metJ	752887..753204 (+)	318	WP_005631186.1	met regulon transcriptional regulator MetJ	-
Q7613_RS03840 (Q7613_03840)	cueR	753218..753604 (-)	387	WP_005663006.1	Cu(I)-responsive transcriptional regulator	-
Q7613_RS03845 (Q7613_03845)	-	753681..753887 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
Q7613_RS03850 (Q7613_03850)	-	753962..754168 (+)	207	WP_005686717.1	heavy-metal-associated domain-containing protein	-
Q7613_RS03855 (Q7613_03855)	-	754242..754448 (+)	207	WP_005686717.1	heavy-metal-associated domain-containing protein	-
Q7613_RS03860 (Q7613_03860)	-	754522..754728 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
Q7613_RS03865 (Q7613_03865)	-	754802..755008 (+)	207	WP_005686717.1	heavy-metal-associated domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 26786.77 Da
• Isoelectric Point: 8.6895

>NTDB_id=864727 Q7613_RS03825 WP_038440789.1 750631..751323(+) (pilD) [Haemophilus influenzae strain 2016N07-308]
MIYFTMFLLGGILGIALWFYLSGFITHLQQEIYATYVELFPQNSSPFQPHFASIQQKKCGHILRYFFSIGVGFIFLQIAF
KDSIFTVWIGLTLIILWTISYLDWHYQLISTTPCLWLLTLGLFGTDNNFSLLTLSESIKSAAIFFIVFYAIYWIAKCYYR
KEAFGRGDYWLAMALGSFIHLETLPHFLLLASVLGICFSLIHRKKKEFLPFAPFMNLSAVIIYFVKYYGY

Nucleotide

• Length: 693 bp

>NTDB_id=864727 Q7613_RS03825 WP_038440789.1 750631..751323(+) (pilD) [Haemophilus influenzae strain 2016N07-308]
ATGATTTACTTCACAATGTTTTTATTAGGCGGCATCTTAGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACGCA
TTTGCAGCAAGAGATTTATGCGACTTACGTTGAATTATTTCCACAAAACAGTTCTCCATTTCAACCGCACTTTGCCTCTA
TTCAACAAAAAAAGTGCGGTCATATTTTGAGGTATTTTTTTAGTATTGGGGTTGGATTTATATTTTTACAAATTGCCTTC
AAAGATTCTATTTTTACTGTATGGATCGGACTCACACTTATTATTCTTTGGACAATCAGTTATCTTGATTGGCACTATCA
ACTTATTTCTACGACACCCTGTTTATGGTTACTTACTCTAGGATTATTTGGCACAGACAATAACTTTTCATTGCTAACGT
TATCTGAAAGCATAAAAAGTGCGGCTATTTTTTTTATTGTTTTCTACGCAATCTATTGGATTGCAAAATGTTATTACAGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCATTTAGAAACCTTACCGCACTT
TTTATTATTAGCCTCAGTTCTTGGAATATGTTTTTCGCTTATTCATAGAAAGAAAAAAGAATTTTTACCTTTTGCCCCTT
TTATGAACTTATCAGCTGTCATCATTTATTTCGTCAAATATTACGGATATTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (92-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Haemophilus influenzae 86-028NP	97.391	100	0.974
pilD	Haemophilus influenzae Rd KW20	95.652	100	0.957