Detailed information NTG0086332

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CPY3401_RS02260
• Genome accession: NZ_AP024599
• Coordinates: 466573..467373 (+)
• Length: 266 a.a.
• NCBI ID: WP_221062719.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 3401
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 461573..472373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CPY3401_RS02225 (CPY3401_04500)	pseH	462068..462610 (+)	543	WP_221062715.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
CPY3401_RS02230 (CPY3401_04510)	-	462543..463481 (-)	939	WP_000833937.1	tetraacyldisaccharide 4'-kinase	-
CPY3401_RS02235 (CPY3401_04520)	-	463478..464260 (-)	783	WP_221062716.1	NAD+ synthase	-
CPY3401_RS02245 (CPY3401_04530)	ilvC	464508..465500 (+)	993	WP_221062717.1	ketol-acid reductoisomerase	-
CPY3401_RS02250 (CPY3401_04540)	minD	465525..466331 (+)	807	WP_221062718.1	septum site-determining protein MinD	-
CPY3401_RS02255 (CPY3401_04550)	minE	466328..466561 (+)	234	WP_180512331.1	cell division topological specificity factor MinE	-
CPY3401_RS02260 (CPY3401_04560)	dprA	466573..467373 (+)	801	WP_221062719.1	DNA-processing protein DprA	Machinery gene
CPY3401_RS02265 (CPY3401_04570)	dprB	467370..467774 (+)	405	WP_000599254.1	Holliday junction resolvase RuvX	Machinery gene
CPY3401_RS02270 (CPY3401_04580)	-	467902..468264 (+)	363	WP_221062720.1	tetratricopeptide repeat protein	-
CPY3401_RS02275 (CPY3401_04590)	-	468452..468790 (+)	339	WP_000699916.1	hypothetical protein	-
CPY3401_RS02280 (CPY3401_04600)	-	468774..469334 (+)	561	WP_221062721.1	hypothetical protein	-
CPY3401_RS02285 (CPY3401_04610)	-	469345..469845 (+)	501	WP_002203590.1	glycoside hydrolase family protein	-
CPY3401_RS07795	-	469865..470026 (+)	162	WP_001871784.1	hypothetical protein	-
CPY3401_RS07975 (CPY3401_04620)	-	470084..470281 (+)	198	WP_001868304.1	hypothetical protein	-
CPY3401_RS02295	-	470363..470743 (+)	381	Protein_454	DUF1294 domain-containing protein	-
CPY3401_RS02300	-	470743..471528 (+)	786	WP_000119830.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29659.55 Da
• Isoelectric Point: 8.9007

>NTDB_id=86332 CPY3401_RS02260 WP_221062719.1 466573..467373(+) (dprA) [Helicobacter pylori strain 3401]
MKSNFQYSALENIPKAFDILKDPPKKLYCAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKAIQEIAQNGLILSEYEKGFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHNLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=86332 CPY3401_RS02260 WP_221062719.1 466573..467373(+) (dprA) [Helicobacter pylori strain 3401]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGCGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGTACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGCGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGGTTTTATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTGAAAAGCGGT
TCTATGAGCAGTGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACAATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.489	100	0.955
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.899	85.338	0.417