Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   KI216_RS06310 Genome accession   NZ_AP024595
Coordinates   1329285..1329992 (+) Length   235 a.a.
NCBI ID   WP_005010706.1    Uniprot ID   A0A4V2DP31
Organism   Acinetobacter bouvetii strain JCM 18991     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1324285..1334992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI216_RS06290 (ACBO_12100) - 1325229..1326215 (+) 987 WP_005010714.1 ion transporter -
  KI216_RS06295 (ACBO_12110) - 1326407..1327327 (+) 921 WP_005010712.1 LysR family transcriptional regulator -
  KI216_RS06300 (ACBO_12120) - 1327479..1328486 (+) 1008 WP_005010711.1 sensor domain-containing diguanylate cyclase -
  KI216_RS06305 (ACBO_12130) - 1328709..1329137 (-) 429 WP_005010708.1 OsmC family protein -
  KI216_RS06310 (ACBO_12140) crp 1329285..1329992 (+) 708 WP_005010706.1 cAMP-activated global transcriptional regulator CRP Regulator
  KI216_RS06315 (ACBO_12150) - 1330211..1331260 (+) 1050 WP_005010703.1 NADP(H)-dependent aldo-keto reductase -
  KI216_RS06320 (ACBO_12160) clpB 1331548..1334127 (+) 2580 WP_005010701.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26392.96 Da        Isoelectric Point: 4.6054

>NTDB_id=86304 KI216_RS06310 WP_005010706.1 1329285..1329992(+) (crp) [Acinetobacter bouvetii strain JCM 18991]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILSEDDEREIVVAYLNAGDF
FGEMGLFETNAQRTAEVRTRDVCEIAEITYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEANSEFSSEEFEEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=86304 KI216_RS06310 WP_005010706.1 1329285..1329992(+) (crp) [Acinetobacter bouvetii strain JCM 18991]
ATGACTTCAAGCTTTTCACAACTAAGCACTGATGCGCTGTCTCCTGGTCAACTCCCTGAGTCAGTTAAAGCATTATTAAA
ACGTGCATATATTAATCGTTATCCTAAACGCACGACTATCGTGGATGCAGGGTCAGAGTCAAAATCTTTATATTTGATTC
TGAAGGGGTCTGTATCAATCATCTTAAGTGAAGATGATGAGCGAGAAATCGTAGTAGCGTACTTAAACGCGGGTGATTTT
TTTGGGGAAATGGGTTTATTTGAAACCAATGCACAGCGCACAGCGGAAGTCCGCACACGTGATGTCTGTGAAATTGCTGA
AATTACCTACGAAAACTTCCATGAATTAAGCAAGCAATATCCAGACCTGAGCTATGCGGTATTTGCTCAGCTGGTGCGCC
GCTTGAAAAATACAACACGCAAAGTGACTGACTTGGCGTTTATAGATGTTTCAGGCCGTATTGCCCGCTGCTTAATCGAT
TTGTCATCGCAGCCAGAAGCAATGATTCTGCCAAATGGCCGTCAAATCCGCATTACCCGTCAAGAAATTGGCCGTATTGT
AGGCTGTTCGCGCGAGATGGTTGGCCGTGTTCTGAAAACTTTAGAAGAACAGGGCATGATTGAGACTGACGGTAAAGCAA
TCTTGATCTTTGATGCATCTTTAGAGGCAAACAGTGAATTCTCTTCTGAGGAATTTGAAGAAGAATAG

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4V2DP31

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

90.213

100

0.902
  crp Vibrio cholerae strain A1552

47.317

87.234

0.413
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4

Multiple sequence alignment