Detailed information NTG0862166

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: Q6H54_RS26345
• Genome accession: NZ_CP130917
• Coordinates: 5226247..5227767 (+)
• Length: 506 a.a.
• NCBI ID: WP_002883134.1
• Uniprot ID: A0A0H3GGF6
• Organism: Klebsiella pneumoniae strain 2023CK-00047
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 5221247..5232767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6H54_RS26325 (Q6H54_26325)	ilvE	5222807..5223736 (-)	930	WP_032422068.1	branched-chain-amino-acid transaminase	-
Q6H54_RS26330 (Q6H54_26330)	ilvM	5223753..5224010 (-)	258	WP_002883170.1	acetolactate synthase 2 small subunit	-
Q6H54_RS26335 (Q6H54_26335)	ilvG	5224007..5225653 (-)	1647	WP_012737117.1	acetolactate synthase 2 catalytic subunit	-
Q6H54_RS28250	ilvX	5225656..5225709 (-)	54	WP_201281575.1	peptide IlvX	-
Q6H54_RS26340 (Q6H54_26340)	ilvL	5225794..5225892 (-)	99	WP_001311244.1	ilv operon leader peptide	-
Q6H54_RS26345 (Q6H54_26345)	comM	5226247..5227767 (+)	1521	WP_002883134.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
Q6H54_RS26350 (Q6H54_26350)	-	5227792..5228130 (-)	339	WP_004146520.1	DUF413 domain-containing protein	-
Q6H54_RS26355 (Q6H54_26355)	hdfR	5228249..5229070 (+)	822	WP_004181639.1	HTH-type transcriptional regulator HdfR	-
Q6H54_RS26360 (Q6H54_26360)	-	5229452..5230249 (-)	798	WP_015060052.1	OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-181	-
Q6H54_RS26365 (Q6H54_26365)	-	5230585..5231847 (-)	1263	WP_000608644.1	IS1380-like element ISEcp1 family transposase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55187.59 Da
• Isoelectric Point: 8.3554

>NTDB_id=862166 Q6H54_RS26345 WP_002883134.1 5226247..5227767(+) (comM) [Klebsiella pneumoniae strain 2023CK-00047]
MSLAIVYTRAALGIEAPLITVEVHLSNGLPGLTMVGLPETTVKEARDRVRSALINSGYAFPAKKITINLAPADLPKEGGR
YDLPIALALLVASEQLNTTRLNQYEFVGELALTGGLRGVPGAIPSAMEAIKAGRRIVVSSDNAAEVGLIGGSDCLVADHL
QEVCAFLAGQTSLSPPLAEAPARDERYEDLLDVIGQQQGKRALEIVAAGGHNLLLIGPPGTGKTMLASRLPGLLPPLSNQ
EALESAAIQSLVNLHTAKTRWRQRPFRAPHHSASLAAMVGGGSIPVPGEISLAHNGVLFLDELPEFERRVLDALREPIES
GKIHISRSRAKIDYPARFQLIAAMNPSPTGHYQGKHNRASPEQTLRYLGRLSGPFLDRFDLSLEIPLPPPGILSQGSQGE
ESSATVRQRVLAARERQMLRQNKLNAHLENREMKNCCRLRREDAVWLEQTLTQLGLSIRAWQRLLKVARTIADLAEVEEI
ERCHLQEALSYRAIDRMLNHLQKMMA

Nucleotide

• Length: 1521 bp

>NTDB_id=862166 Q6H54_RS26345 WP_002883134.1 5226247..5227767(+) (comM) [Klebsiella pneumoniae strain 2023CK-00047]
ATGTCGCTCGCTATCGTCTATACTCGCGCGGCGCTCGGTATCGAAGCGCCATTGATTACCGTTGAGGTTCATCTCAGCAA
CGGTCTTCCTGGTCTAACTATGGTCGGGCTGCCGGAAACCACCGTGAAAGAGGCCCGCGACCGGGTCCGCAGCGCCCTGA
TCAACAGCGGCTACGCTTTTCCTGCGAAGAAGATAACCATTAACCTGGCGCCAGCGGATCTGCCCAAAGAAGGCGGACGA
TACGATCTGCCCATCGCTCTCGCGCTTCTCGTTGCCTCAGAGCAGCTCAACACGACGCGACTGAATCAATATGAGTTTGT
GGGCGAACTCGCCCTTACAGGTGGGTTACGAGGCGTTCCAGGGGCGATCCCCAGCGCAATGGAGGCCATCAAAGCCGGCC
GGCGCATTGTCGTCTCCTCTGACAATGCGGCGGAGGTCGGCCTGATCGGCGGCAGCGATTGTCTGGTCGCCGACCATCTG
CAGGAGGTTTGCGCATTTCTTGCGGGGCAGACATCGCTTTCGCCGCCTCTCGCCGAGGCGCCTGCTCGGGATGAACGCTA
CGAAGATCTGCTCGATGTTATCGGCCAGCAGCAGGGCAAACGAGCGCTGGAGATTGTGGCCGCCGGTGGTCACAACCTGC
TCCTGATAGGCCCGCCCGGGACCGGGAAAACCATGCTAGCCAGCCGACTCCCCGGTCTCCTGCCGCCATTAAGCAATCAG
GAAGCGCTGGAGAGCGCGGCCATACAGAGTCTGGTCAACCTCCACACCGCAAAGACGCGGTGGCGTCAGAGGCCGTTCCG
CGCCCCCCACCATAGCGCCTCGCTGGCAGCGATGGTGGGCGGCGGCTCGATACCGGTCCCCGGTGAGATTTCCCTGGCCC
ATAATGGCGTGCTGTTTCTTGATGAACTGCCGGAGTTTGAGCGGCGGGTACTGGATGCGCTACGCGAACCCATTGAGTCA
GGCAAGATCCACATATCACGCTCGCGCGCCAAAATTGACTATCCGGCGCGCTTTCAGCTTATTGCAGCGATGAATCCAAG
CCCGACAGGACATTATCAGGGTAAACATAATCGTGCATCGCCGGAGCAGACATTGCGCTACCTTGGACGCCTGTCAGGCC
CCTTCCTCGACCGCTTCGATCTTTCCTTAGAGATCCCATTGCCGCCGCCAGGAATACTGAGTCAGGGCTCGCAGGGCGAA
GAATCGAGCGCAACGGTCCGGCAGCGGGTGCTGGCGGCGCGTGAACGACAAATGCTCAGGCAAAATAAACTCAATGCCCA
TCTTGAGAATCGTGAAATGAAGAACTGCTGCCGCTTAAGGCGGGAGGATGCTGTCTGGCTGGAACAGACGCTAACGCAGC
TGGGGCTTTCTATTCGCGCCTGGCAGCGTCTGTTAAAGGTTGCGAGAACCATTGCCGATCTGGCAGAGGTTGAAGAGATT
GAACGCTGTCATTTGCAGGAGGCGCTCAGCTATCGGGCAATTGATCGGATGCTCAACCATCTGCAGAAAATGATGGCGTA
A

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

3D structure

• AlphaFold DB: A0A0H3GGF6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	60.078	100	0.607
comM	Glaesserella parasuis strain SC1401	59.725	100	0.601
comM	Vibrio cholerae strain A1552	60.04	99.407	0.597
comM	Vibrio campbellii strain DS40M4	59.524	99.605	0.593
comM	Legionella pneumophila str. Paris	50.201	98.419	0.494
comM	Legionella pneumophila strain ERS1305867	50.201	98.419	0.494
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.488	100	0.447