Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   KI212_RS03445 Genome accession   NZ_AP024589
Coordinates   732167..732730 (-) Length   187 a.a.
NCBI ID   WP_059106497.1    Uniprot ID   A0AAP8PQ38
Organism   Staphylococcus auricularis strain JCM 2421     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 727167..737730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI212_RS03420 (JCM2421_07130) - 727418..728776 (+) 1359 WP_059106494.1 TrkH family potassium uptake protein -
  KI212_RS03425 (JCM2421_07140) - 728936..730444 (+) 1509 WP_059106495.1 bifunctional metallophosphatase/5'-nucleotidase -
  KI212_RS03430 (JCM2421_07150) - 730521..731429 (-) 909 WP_059106496.1 DUF2268 domain-containing protein -
  KI212_RS03445 (JCM2421_07160) comK/comK1 732167..732730 (-) 564 WP_059106497.1 competence protein ComK Regulator
  KI212_RS03450 (JCM2421_07170) - 732981..733199 (+) 219 WP_059106498.1 IDEAL domain-containing protein -
  KI212_RS03455 (JCM2421_07180) - 733297..734283 (-) 987 WP_059106499.1 lipoate--protein ligase -
  KI212_RS03460 (JCM2421_07190) - 734483..734668 (+) 186 WP_059106500.1 YkvS family protein -
  KI212_RS03465 (JCM2421_07200) - 734673..735275 (+) 603 WP_059106501.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  KI212_RS03470 (JCM2421_07210) - 735573..735953 (+) 381 WP_059106502.1 phage holin family protein -
  KI212_RS03475 (JCM2421_07220) - 736065..736523 (+) 459 WP_059106503.1 peptidoglycan recognition protein family protein -
  KI212_RS03480 (JCM2421_07230) - 736736..737287 (+) 552 WP_059106504.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 187 a.a.        Molecular weight: 22060.42 Da        Isoelectric Point: 9.4659

>NTDB_id=86216 KI212_RS03445 WP_059106497.1 732167..732730(-) (comK/comK1) [Staphylococcus auricularis strain JCM 2421]
MNFQYVIKQGDMALIPSESVHDMFERTTVLKYNDTPLTVKERTQKIIDRSCRFYGSTYAYKKEDTIRITGITSKPPLLFT
PLFPTYFFPTHSDRKQENAWVNIHYIESIKPLKDRKCKITFVDKQTLTLNVSAHSINHQFLNTVFYYYMMDRLARVTTFD
PDAPIDYSKPQLNIYEALAKYSILEKK

Nucleotide


Download         Length: 564 bp        

>NTDB_id=86216 KI212_RS03445 WP_059106497.1 732167..732730(-) (comK/comK1) [Staphylococcus auricularis strain JCM 2421]
ATGAATTTCCAATATGTCATTAAACAGGGAGATATGGCTTTAATCCCTAGTGAATCAGTCCACGATATGTTTGAAAGGAC
TACCGTATTAAAGTATAACGATACGCCATTAACCGTCAAAGAACGTACGCAAAAGATCATTGACCGCTCTTGCCGTTTTT
ACGGTAGCACCTACGCCTACAAAAAAGAAGATACGATTCGTATTACCGGCATCACTAGTAAACCACCGTTATTATTTACA
CCTCTATTTCCTACTTATTTCTTCCCTACTCACTCAGACCGAAAGCAAGAAAACGCGTGGGTTAATATTCACTACATTGA
ATCGATTAAACCACTTAAAGATAGAAAATGTAAAATCACTTTTGTCGATAAACAAACATTAACGCTCAACGTCTCAGCAC
ACAGCATCAATCACCAATTCCTCAACACTGTCTTCTATTACTATATGATGGACCGTCTCGCCCGCGTCACGACTTTTGAC
CCCGATGCTCCCATTGACTATTCCAAGCCTCAACTTAATATTTACGAAGCGCTAGCCAAATACTCAATATTAGAGAAAAA
GTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(4-152)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

54.098

97.861

0.529
  comK/comK1 Staphylococcus aureus N315

54.098

97.861

0.529

Multiple sequence alignment