Detailed information NTG0861531

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: Q6357_RS07975
• Genome accession: NZ_CP130888
• Coordinates: 1630650..1631825 (+)
• Length: 391 a.a.
• NCBI ID: WP_024719243.1
• Uniprot ID: A0A081LEM4
• Organism: Bacillus altitudinis strain 28M1-1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1625650..1636825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6357_RS07955 (Q6357_07955)	-	1626242..1627438 (+)	1197	WP_039169832.1	glycosyltransferase	-
Q6357_RS07960 (Q6357_07960)	-	1627573..1628640 (+)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
Q6357_RS07965 (Q6357_07965)	-	1628678..1629775 (-)	1098	Protein_1513	LCP family protein	-
Q6357_RS07970 (Q6357_07970)	-	1629760..1630428 (-)	669	WP_017357860.1	YigZ family protein	-
Q6357_RS07975 (Q6357_07975)	degS	1630650..1631825 (+)	1176	WP_024719243.1	sensor histidine kinase	Regulator
Q6357_RS07980 (Q6357_07980)	degU	1631890..1632579 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
Q6357_RS07985 (Q6357_07985)	-	1632791..1633633 (+)	843	WP_024719242.1	DegV family protein	-
Q6357_RS07990 (Q6357_07990)	comFA	1634005..1635132 (+)	1128	WP_110487132.1	DEAD/DEAH box helicase	Machinery gene
Q6357_RS07995 (Q6357_07995)	-	1635197..1635490 (+)	294	WP_008348267.1	late competence development ComFB family protein	-
Q6357_RS08000 (Q6357_08000)	-	1635451..1636173 (+)	723	WP_304717666.1	ComF family protein	-
Q6357_RS08005 (Q6357_08005)	-	1636230..1636649 (+)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.27 Da
• Isoelectric Point: 5.8757

>NTDB_id=861531 Q6357_RS07975 WP_024719243.1 1630650..1631825(+) (degS) [Bacillus altitudinis strain 28M1-1]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=861531 Q6357_RS07975 WP_024719243.1 1630650..1631825(+) (degS) [Bacillus altitudinis strain 28M1-1]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCTTAGTAGAAGAGCTCAAACAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCTTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGCCAGATCACAGTGGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAAGCAAAACAAGATTTTGGACTTAGAATTATTGAAGCTCAAGAAGAAGAACGTAAAAGGGTATCCCGTGA
AATTCATGACGGTCCGGCACAGATGCTGGCAAACGTGATGATGCGCTCTGAATTAATTGAACGGATTTTCAGAGATCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATCACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAATTCGAAGTGGCAC
TGTTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A081LEM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841