Detailed information NTG0860763

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QAD56_RS05645
• Genome accession: NZ_CP130625
• Coordinates: 1178019..1178819 (-)
• Length: 266 a.a.
• NCBI ID: WP_373930286.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS08
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1173019..1183819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAD56_RS05610 (QAD56_05600)	-	1173850..1174635 (-)	786	Protein_1087	hypothetical protein	-
QAD56_RS05615 (QAD56_05605)	-	1174635..1175021 (-)	387	WP_373930278.1	DUF1294 domain-containing protein	-
QAD56_RS05620 (QAD56_05610)	-	1175362..1176018 (-)	657	WP_373931624.1	glycoside hydrolase family protein	-
QAD56_RS05625 (QAD56_05615)	-	1176047..1176607 (-)	561	WP_373930280.1	hypothetical protein	-
QAD56_RS05630 (QAD56_05620)	-	1176591..1176929 (-)	339	WP_373930282.1	hypothetical protein	-
QAD56_RS05635	-	1177119..1177424 (-)	306	WP_373931625.1	tetratricopeptide repeat protein	-
QAD56_RS05640 (QAD56_05630)	dprB	1177618..1178022 (-)	405	WP_373930284.1	Holliday junction resolvase RuvX	Machinery gene
QAD56_RS05645 (QAD56_05635)	dprA	1178019..1178819 (-)	801	WP_373930286.1	DNA-processing protein DprA	Machinery gene
QAD56_RS05650 (QAD56_05640)	minE	1178831..1179064 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
QAD56_RS05655 (QAD56_05645)	minD	1179061..1179867 (-)	807	WP_231245509.1	septum site-determining protein MinD	-
QAD56_RS05660 (QAD56_05650)	ilvC	1179892..1180884 (-)	993	WP_373930291.1	ketol-acid reductoisomerase	-
QAD56_RS05670 (QAD56_05660)	-	1181133..1181915 (+)	783	WP_373930293.1	NAD+ synthase	-
QAD56_RS05675 (QAD56_05665)	-	1181912..1182850 (+)	939	WP_373930294.1	tetraacyldisaccharide 4'-kinase	-
QAD56_RS05680 (QAD56_05670)	pseH	1182783..1183325 (-)	543	WP_373930296.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29817.79 Da
• Isoelectric Point: 9.1322

>NTDB_id=860763 QAD56_RS05645 WP_373930286.1 1178019..1178819(-) (dprA) [Helicobacter pylori strain BS08]
MKSNFQYSALENIPKTFDILKDPPKKLYCAGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=860763 QAD56_RS05645 WP_373930286.1 1178019..1178819(-) (dprA) [Helicobacter pylori strain BS08]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAACCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGCGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCAGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTAATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTCTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTACCCCAGCGTCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAGAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.489	100	0.955
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414