Detailed information NTG0860741

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QAP04_RS05515
• Genome accession: NZ_CP130623
• Coordinates: 1159234..1160034 (-)
• Length: 266 a.a.
• NCBI ID: WP_140512197.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain BS04
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1154234..1165034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QAP04_RS05485 (QAP04_05470)	recJ	1155017..1156567 (+)	1551	WP_373961058.1	single-stranded-DNA-specific exonuclease RecJ	-
QAP04_RS05490 (QAP04_05475)	-	1156567..1157448 (+)	882	WP_373961059.1	RluA family pseudouridine synthase	-
QAP04_RS05495 (QAP04_05480)	-	1157544..1158104 (-)	561	WP_373961060.1	hypothetical protein	-
QAP04_RS05500 (QAP04_05485)	-	1158088..1158426 (-)	339	WP_120918640.1	hypothetical protein	-
QAP04_RS05505 (QAP04_05490)	-	1158549..1158701 (-)	153	WP_373961061.1	hypothetical protein	-
QAP04_RS05510 (QAP04_05495)	dprB	1158833..1159237 (-)	405	WP_237016739.1	Holliday junction resolvase RuvX	Machinery gene
QAP04_RS05515 (QAP04_05500)	dprA	1159234..1160034 (-)	801	WP_140512197.1	DNA-processing protein DprA	Machinery gene
QAP04_RS05520 (QAP04_05505)	minE	1160041..1160274 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
QAP04_RS05525 (QAP04_05510)	minD	1160271..1161077 (-)	807	WP_373961062.1	septum site-determining protein MinD	-
QAP04_RS05530 (QAP04_05515)	ilvC	1161101..1162093 (-)	993	WP_373961063.1	ketol-acid reductoisomerase	-
QAP04_RS05540 (QAP04_05525)	-	1162342..1163124 (+)	783	WP_373961064.1	NAD+ synthase	-
QAP04_RS05545 (QAP04_05530)	-	1163121..1164059 (+)	939	WP_373961065.1	tetraacyldisaccharide 4'-kinase	-
QAP04_RS05550 (QAP04_05535)	pseH	1163992..1164534 (-)	543	WP_373961066.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29842.73 Da
• Isoelectric Point: 8.2191

>NTDB_id=860741 QAP04_RS05515 WP_140512197.1 1159234..1160034(-) (dprA) [Helicobacter pylori strain BS04]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=860741 QAP04_RS05515 WP_140512197.1 1159234..1160034(-) (dprA) [Helicobacter pylori strain BS04]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTACAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCTCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41