Detailed information NTG0860621

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: Q3Y59_RS16790
• Genome accession: NZ_CP130608
• Coordinates: 3404155..3405318 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain XDY66
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3399155..3410318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3Y59_RS16760 (Q3Y59_16760)	-	3399420..3399839 (-)	420	WP_069473598.1	TIGR03826 family flagellar region protein	-
Q3Y59_RS16765 (Q3Y59_16765)	comFC	3399913..3400602 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
Q3Y59_RS16770 (Q3Y59_16770)	-	3400608..3400892 (-)	285	WP_057080260.1	competence protein ComFB	-
Q3Y59_RS16775 (Q3Y59_16775)	comFA	3400950..3402335 (-)	1386	WP_095318332.1	DEAD/DEAH box helicase	Machinery gene
Q3Y59_RS16780 (Q3Y59_16780)	-	3402443..3403291 (-)	849	WP_058906396.1	DegV family protein	-
Q3Y59_RS16785 (Q3Y59_16785)	degU	3403389..3404078 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
Q3Y59_RS16790 (Q3Y59_16790)	degS	3404155..3405318 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
Q3Y59_RS16795 (Q3Y59_16795)	-	3405541..3406188 (+)	648	WP_003151384.1	YigZ family protein	-
Q3Y59_RS16800 (Q3Y59_16800)	-	3406193..3407407 (+)	1215	WP_003151383.1	LCP family protein	-
Q3Y59_RS16805 (Q3Y59_16805)	-	3407497..3408573 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
Q3Y59_RS16810 (Q3Y59_16810)	-	3408706..3409902 (-)	1197	WP_069013672.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=860621 Q3Y59_RS16790 WP_003151385.1 3404155..3405318(-) (degS) [Bacillus velezensis strain XDY66]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=860621 Q3Y59_RS16790 WP_003151385.1 3404155..3405318(-) (degS) [Bacillus velezensis strain XDY66]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948